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E3Y6V5 (E3Y6V5_SHIFL) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
dTDP-glucose 4,6-dehydratase RuleBase RU004473
EC=4.2.1.46 RuleBase RU004473
Gene names
Name:rfbB EMBL EFS12214.1
ORF Names:SF2457T_3802 EMBL EFS12214.1
OrganismShigella flexneri 2a str. 2457T EMBL EFS12214.1
Taxonomic identifier198215 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Shigella ›

Protein attributes

Sequence length355 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

dTDP-alpha-D-glucose = dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O. RuleBase RU004473

Cofactor

NAD By similarity. RuleBase RU004473

Sequence similarities

Belongs to the sugar epimerase family. dTDP-glucose dehydratase subfamily. RuleBase RU004473

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequences

Sequence LengthMass (Da)Tools
E3Y6V5 [UniParc].

Last modified February 8, 2011. Version 1.
Checksum: F87CA968D9ACA900

FASTA35539,810
        10         20         30         40         50         60 
MRKILITGGA GFIGSALVRY IINETSDAVV VVDKLTYAGN LMSLAPVAQS ERFAFEKVDI 

        70         80         90        100        110        120 
CDRAELARVF TEHQPDCVMH LAAESHVDRS IDGPAAFIET NIVGTYTLLE AARAYWNTLT 

       130        140        150        160        170        180 
EDKKSAFRFH HISTDEVYGD LHSTDDFFTE TTPYAPSSPY SASKASSDHL VRAWLRTYGL 

       190        200        210        220        230        240 
PTLITNCSNN YGPYHFPEKL IPLMILNALA GKPLPVYGNG QQIRDWLYVE DHARALYCVA 

       250        260        270        280        290        300 
TTGKVGETYN IGGHNERKNL DVVETICELL EELASNKPHG VAYYRDLITF VADRPGHDLR 

       310        320        330        340        350 
YAIDASKIAR ELGWLPQETF ESGMRKTVQW YLANESWWKQ VQDGSYQGER LGLKG

« Hide

References

[1]Rasko D., Redman J., Daugherty S.C., Tallon L., Sadzewicz L., Jones K., Santana-Cruz I., Liu X.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2457T EMBL EFS12214.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ADUV01000053 Genomic DNA. Translation: EFS12214.1.
RefSeqNP_839088.1. NC_004741.1.

3D structure databases

ProteinModelPortalE3Y6V5.
SMRE3Y6V5. Positions 1-350.
ModBaseSearch...

Proteomic databases

PRIDEE3Y6V5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEFS12214; EFS12214; SF2457T_3802.
GeneID1080117.
KEGGsfx:S3898.
PATRIC18709670. VBIShiFle31049_4250.

Phylogenomic databases

KOK01710.
OMAARSWWNT.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR005888. dTDP_Gluc_deHydtase.
IPR001509. Epimerase_deHydtase.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR10366:SF41. PTHR10366:SF41. 1 hit.
PfamPF01370. Epimerase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01181. dTDP_gluc_dehyt. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3Y6V5_SHIFL
AccessionPrimary (citable) accession number: E3Y6V5
Entry history
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: April 3, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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