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Protein
Submitted name:

Cytochrome b

Gene

cytb

Organism
Egretta garzetta (little egret)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome bImported
Gene namesi
Name:cytbImported
Encoded oniMitochondrionImported
OrganismiEgretta garzetta (little egret)Imported
Taxonomic identifieri188379 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePelecaniformesArdeidaeEgretta

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei65 – 8521HelicalSequence analysisAdd
BLAST
Transmembranei97 – 11721HelicalSequence analysisAdd
BLAST
Transmembranei123 – 14321HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionImported

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 156136Sequence analysisPRO_5003183064Add
BLAST

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 156156CYTB_CTERInterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

Gene3Di1.20.810.10. 1 hit.
InterProiIPR005798. Cyt_b/b6_C.
IPR027387. Cytb/b6-like.
[Graphical view]
PfamiPF00032. Cytochrom_B_C. 1 hit.
[Graphical view]
SUPFAMiSSF81648. SSF81648. 1 hit.
PROSITEiPS51003. CYTB_CTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

E3WH87-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
FSTKDILGFM LMLLPLTTLA LFSPNLLGDP ENFTPANPLV TPPHIKPEWY
60 70 80 90 100
FLFAYAILRS IPNKLGGVLA LAASVLILFL IPLLHKSKQR TLAFRPLSQL
110 120 130 140 150
LFWTLVANLL ILTWVGSQPV EHPFIIIGQL ASITYFTILL ILFPATGALE

NKMLNF
Length:156
Mass (Da):17,414
Last modified:February 8, 2011 - v1
Checksum:i7CE2407289D11941
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported
Non-terminal residuei156 – 1561Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB600557 Genomic DNA. Translation: BAJ34729.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB600557 Genomic DNA. Translation: BAJ34729.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di1.20.810.10. 1 hit.
InterProiIPR005798. Cyt_b/b6_C.
IPR027387. Cytb/b6-like.
[Graphical view]
PfamiPF00032. Cytochrom_B_C. 1 hit.
[Graphical view]
SUPFAMiSSF81648. SSF81648. 1 hit.
PROSITEiPS51003. CYTB_CTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Egretta garzetta cytochrome b gene, partial sequence."
    Kim K., Kanesaka H., Tsuda Y.
    Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: K132atrImported.
    Tissue: BloodImported.

Entry informationi

Entry nameiE3WH87_9AVES
AccessioniPrimary (citable) accession number: E3WH87
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: January 20, 2016
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.