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Protein
Submitted name:

Cocaine-and amphetamine-regulated transcript ch4

Gene

cart ch4

Organism
Oryzias latipes (Japanese rice fish) (Japanese killifish)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Cocaine-and amphetamine-regulated transcript ch4Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:cart ch4Imported
Synonyms:CARTPTImported
OrganismiOryzias latipes (Japanese rice fish) (Japanese killifish)
Taxonomic identifieri8090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeBeloniformesAdrianichthyidaeOryziinaeOryzias
Proteomesi
  • UP000001038 Componenti: Chromosome 4

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 10785Sequence analysisPRO_5007653865Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J0KJ. Eukaryota.
ENOG410YRI1. LUCA.
GeneTreeiENSGT00390000018319.
OMAiSASCWLL.
OrthoDBiEOG091G0Y1C.
TreeFamiTF332948.

Family and domain databases

Gene3Di4.10.40.30. 1 hit.
InterProiIPR009106. CART.
[Graphical view]
PANTHERiPTHR16655. PTHR16655. 1 hit.
PfamiPF06373. CART. 1 hit.
[Graphical view]
SUPFAMiSSF64546. SSF64546. 1 hit.

Sequencei

Sequence statusi: Complete.

E3WET6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSSRMLLLS ASCWLLVALG SCEEQMEERS PEYEAFKTQE EKELIEALQE
60 70 80 90 100
VLEKLRNKQL PSSEKKLGWL PPCNTSEQCA VRKGARVGKL CGCPRGMECD

FSILKCL
Length:107
Mass (Da):12,069
Last modified:February 8, 2011 - v1
Checksum:iD8099066F4D7DD6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAAF04027895 Genomic DNA. No translation available.
AB568293 mRNA. Translation: BAJ39822.1.
RefSeqiNP_001191709.1. NM_001204780.1.
UniGeneiOla.4282.

Genome annotation databases

EnsembliENSORLT00000016584; ENSORLP00000016583; ENSORLG00000013234.
GeneIDi100533498.
KEGGiola:100533498.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAAF04027895 Genomic DNA. No translation available.
AB568293 mRNA. Translation: BAJ39822.1.
RefSeqiNP_001191709.1. NM_001204780.1.
UniGeneiOla.4282.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSORLT00000016584; ENSORLP00000016583; ENSORLG00000013234.
GeneIDi100533498.
KEGGiola:100533498.

Phylogenomic databases

eggNOGiENOG410J0KJ. Eukaryota.
ENOG410YRI1. LUCA.
GeneTreeiENSGT00390000018319.
OMAiSASCWLL.
OrthoDBiEOG091G0Y1C.
TreeFamiTF332948.

Family and domain databases

Gene3Di4.10.40.30. 1 hit.
InterProiIPR009106. CART.
[Graphical view]
PANTHERiPTHR16655. PTHR16655. 1 hit.
PfamiPF06373. CART. 1 hit.
[Graphical view]
SUPFAMiSSF64546. SSF64546. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE3WET6_ORYLA
AccessioniPrimary (citable) accession number: E3WET6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: September 7, 2016
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.