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Protein
Submitted name:

Cocaine- and amphetamine-regulated transcript 1

Gene

cart ch4

Organism
Oryzias latipes (Japanese rice fish) (Japanese killifish)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Cocaine- and amphetamine-regulated transcript 1Imported
Submitted name:
Cocaine-and amphetamine-regulated transcript ch4Imported
Gene namesi
Name:cart ch4Imported
Synonyms:LOC100533498Imported
OrganismiOryzias latipes (Japanese rice fish) (Japanese killifish)Imported
Taxonomic identifieri8090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaAtherinomorphaeBeloniformesAdrianichthyidaeOryziinaeOryzias
Proteomesi
  • UP000001038 Componenti: Chromosome 4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 22Sequence analysisAdd BLAST22
ChainiPRO_501408879823 – 107Sequence analysisAdd BLAST85

Interactioni

Protein-protein interaction databases

STRINGi8090.ENSORLP00000016583

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili38 – 58Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, SignalSequence analysis

Phylogenomic databases

eggNOGiENOG410J0KJ Eukaryota
ENOG410YRI1 LUCA
GeneTreeiENSGT00390000018319
OMAiSASCWLL
OrthoDBiEOG091G0Y1C
TreeFamiTF332948

Family and domain databases

Gene3Di4.10.40.30, 1 hit
InterProiView protein in InterPro
IPR009106 CART
IPR036722 CART_C_sf
PANTHERiPTHR16655 PTHR16655, 1 hit
PfamiView protein in Pfam
PF06373 CART, 1 hit
SUPFAMiSSF64546 SSF64546, 1 hit

Sequencei

Sequence statusi: Complete.

E3WET6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVSSRMLLLS ASCWLLVALG SCEEQMEERS PEYEAFKTQE EKELIEALQE
60 70 80 90 100
VLEKLRNKQL PSSEKKLGWL PPCNTSEQCA VRKGARVGKL CGCPRGMECD

FSILKCL
Length:107
Mass (Da):12,069
Last modified:February 8, 2011 - v1
Checksum:iD8099066F4D7DD6A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BAAF04027895 Genomic DNA No translation available.
AB568293 mRNA Translation: BAJ39822.1
RefSeqiNP_001191709.1, NM_001204780.1
UniGeneiOla.4282

Genome annotation databases

EnsembliENSORLT00000016584; ENSORLP00000016583; ENSORLG00000013234
GeneIDi100533498
KEGGiola:100533498

Similar proteinsi

Entry informationi

Entry nameiE3WET6_ORYLA
AccessioniPrimary (citable) accession number: E3WET6
Entry historyiIntegrated into UniProtKB/TrEMBL: February 8, 2011
Last sequence update: February 8, 2011
Last modified: March 28, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health