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E3SLL2 (E3SLL2_9CAUD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SSSM7_299 EMBL ADO98360.1
OrganismSynechococcus phage S-SSM7 EMBL ADO98360.1
Taxonomic identifier445686 [NCBI]
Taxonomic lineageVirusesdsDNA viruses, no RNA stageCaudoviralesMyoviridae

Protein attributes

Sequence length128 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding671Zinc PDB 3UWA PDB 3UWB
Metal binding1091Zinc; via tele nitrogen PDB 3UWA PDB 3UWB
Metal binding1131Zinc; via tele nitrogen PDB 3UWA PDB 3UWB
Binding site1021Chloride; via amide nitrogen PDB 3UWB

Sequences

Sequence LengthMass (Da)Tools
E3SLL2 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 55CCC9937B044B51

FASTA12814,611
        10         20         30         40         50         60 
MSELYDQMCE AMWASDGIGL AAPQVGINKR VIVVDETTEE HGKYAHLMVN PKITWKSEEK 

        70         80         90        100        110        120 
VLFDEGCLSV PDQNGEVLRP KSIKVTFQNK DGKYKKWKLD GLAARVVQHE IDHLEGILFV 


DYFNDKEN 

« Hide

References

[1]"Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments."
Sullivan M.B., Huang K.H., Ignacio-Espinoza J.C., Berlin A.M., Kelly L., Weigele P.R., Defrancesco A.S., Kern S.E., Thompson L.R., Young S., Yandava C., Fu R., Krastins B., Chase M., Sarracino D., Osburne M.S., Henn M.R., Chisholm S.W.
Environ. Microbiol. 12:3035-3056(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 8109-3 EMBL ADO98360.1.
[2]"Structure and function of a cyanophage-encoded peptide deformylase."
Frank J.A., Lorimer D., Youle M., Witte P., Craig T., Abendroth J., Rohwer F., Edwards R.A., Segall A.M., Burgin A.B.
ISME J. 7:1150-1160(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.70 ANGSTROMS) IN COMPLEX WITH CHLORIDE AND ZINC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GU071098 Genomic DNA. Translation: ADO98360.1.
RefSeqYP_004324347.1. NC_015287.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3UWAX-ray1.95A1-128[»]
3UWBX-ray1.70A1-128[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID10328864.

Family and domain databases

Gene3D3.90.45.10. 1 hit.
HAMAPMF_00163. Pep_deformylase.
InterProIPR000181. Fmet_deformylase.
IPR023635. Peptide_deformylase.
[Graphical view]
PANTHERPTHR10458. PTHR10458. 1 hit.
PfamPF01327. Pep_deformylase. 1 hit.
[Graphical view]
PIRSFPIRSF004749. Pep_def. 1 hit.
PRINTSPR01576. PDEFORMYLASE.
SUPFAMSSF56420. SSF56420. 1 hit.
TIGRFAMsTIGR00079. pept_deformyl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3SLL2_9CAUD
AccessionPrimary (citable) accession number: E3SLL2
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)