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E3S4W2

- E3S4W2_PYRTT

UniProt

E3S4W2 - E3S4W2_PYRTT

Protein

DNA ligase

Gene

PTT_17650

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PTT_17650Imported
    OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
    Taxonomic identifieri861557 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
    ProteomesiUP000001067: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 2 hits.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3S4W2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTEDTPMPDA DAIRENTLMY GHDDDLDDKY PTRPINLHKT LPFHTLFTDL    50
    FNPLMETQKR KQPAGARRRV GPHGHSNMSP HEAKRNIIQR FIANWRKQVG 100
    NDFYPAMRLI IPEKDRDRAM YGLKEKAIAK VLIKLTRIGK DSDDAKHMLN 150
    WKLPGQLNKA SASTAGDFAG RCYEILSTRQ LKTEYSDMTI AEVNNALDRL 200
    SQVGAEDEQV KIFQRFYRRM NAEEMTWLIR MILRQMKIGA TEKTFLDIWH 250
    PDAETLFNIS SNLRRVCWEL FDIELRLQGE DTGLSLMQCF QPQLAQFQDK 300
    VGSFEKLVTR FKGDENDDTF WIEEKLDGER MQLHMMEDPD APGGKLFGFW 350
    SRKAKDYAYL YGRHFDGDEA GALTRFITDA FGENVRNIIL DGEMITWDME 400
    TDHIVGFGTL KTAALSEKEN KTNKNTGQRP LFRVFDCVYL NDKLLTQYTL 450
    RDRRRALESA VKGVTRRLEV HPYIEARSHT EIEPALRKVI AESSEGLVLK 500
    NPRSMYCLNQ RNNDWMKVKP EYMSEFGESL DCIVVGGYFG SGHRGGVHSS 550
    FLCALLTDKD AKPGDPKYEH CWSFFKVGGG FSREDYAAIR GRTEGKWHNW 600
    DRRRPPPFIE LGGHEQNRQH ERPDQWIRPS DSVVLECKAA SVESSDKFRS 650
    TLTLRFPRFK LLRVDKRWDQ ALSIQEFLDV KSRAEKEKSE KEKEFKIEQS 700
    RRKKARTTKK PLTVVGDDAV ITPYAGAVSK VFEGLTFYIM TEQVHPSKKS 750
    KADLEALVKA NGGRLIQRDT TAKDLVIVAD KRLIKVASLE KRGTNNIVKP 800
    IWLQDCIMQN ERDAGAPPYL LPFEPNRHMY YLHDDDQMDY EANLDDNGDS 850
    YARDITDVDE MRRLLDGVEI PKSKFSRDAF LEQLEGHGED FSQFKTYMFQ 900
    NVKAKFSGEV GSELRVRLAK NYVRFGGGQV ADGGDEEGVT HVVVADGQTS 950
    AAKGKARVNG LARVVGLGWI EKCWEEGTRI DEERFQWG 988
    Length:988
    Mass (Da):113,531
    Last modified:January 11, 2011 - v1
    Checksum:i6738E9AB3B578986
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL537210 Genomic DNA. Translation: EFQ86998.1.
    RefSeqiXP_003304917.1. XM_003304869.1.

    Genome annotation databases

    EnsemblFungiiEFQ86998; EFQ86998; PTT_17650.
    GeneIDi10516960.
    KEGGipte:PTT_17650.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL537210 Genomic DNA. Translation: EFQ86998.1 .
    RefSeqi XP_003304917.1. XM_003304869.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EFQ86998 ; EFQ86998 ; PTT_17650 .
    GeneIDi 10516960.
    KEGGi pte:PTT_17650.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    3.40.50.10190. 2 hits.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 2 hits.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
      Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
      Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 0-1Imported.

    Entry informationi

    Entry nameiE3S4W2_PYRTT
    AccessioniPrimary (citable) accession number: E3S4W2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3