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Protein

DNA ligase

Gene

PTT_17650

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotation
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_17650Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
Proteomesi
  • UP000001067 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi861557.XP_003304917.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini432 – 557DNA_LIGASE_A3InterPro annotationAdd BLAST126
Domaini727 – 811BRCTInterPro annotationAdd BLAST85
Domaini894 – 987BRCTInterPro annotationAdd BLAST94

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili674 – 701Sequence analysisAdd BLAST28

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0966 Eukaryota
COG1793 LUCA
KOiK10777
OrthoDBiEOG092C18KW

Family and domain databases

CDDicd00027 BRCT, 1 hit
Gene3Di1.10.3260.10, 1 hit
3.40.50.10190, 2 hits
InterProiView protein in InterPro
IPR001357 BRCT_dom
IPR036420 BRCT_dom_sf
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR029710 LIG4
IPR012340 NA-bd_OB-fold
PANTHERiPTHR10459:SF7 PTHR10459:SF7, 1 hit
PfamiView protein in Pfam
PF16589 BRCT_2, 1 hit
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SMARTiView protein in SMART
SM00292 BRCT, 2 hits
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
SSF52113 SSF52113, 2 hits
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS50172 BRCT, 2 hits
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E3S4W2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEDTPMPDA DAIRENTLMY GHDDDLDDKY PTRPINLHKT LPFHTLFTDL
60 70 80 90 100
FNPLMETQKR KQPAGARRRV GPHGHSNMSP HEAKRNIIQR FIANWRKQVG
110 120 130 140 150
NDFYPAMRLI IPEKDRDRAM YGLKEKAIAK VLIKLTRIGK DSDDAKHMLN
160 170 180 190 200
WKLPGQLNKA SASTAGDFAG RCYEILSTRQ LKTEYSDMTI AEVNNALDRL
210 220 230 240 250
SQVGAEDEQV KIFQRFYRRM NAEEMTWLIR MILRQMKIGA TEKTFLDIWH
260 270 280 290 300
PDAETLFNIS SNLRRVCWEL FDIELRLQGE DTGLSLMQCF QPQLAQFQDK
310 320 330 340 350
VGSFEKLVTR FKGDENDDTF WIEEKLDGER MQLHMMEDPD APGGKLFGFW
360 370 380 390 400
SRKAKDYAYL YGRHFDGDEA GALTRFITDA FGENVRNIIL DGEMITWDME
410 420 430 440 450
TDHIVGFGTL KTAALSEKEN KTNKNTGQRP LFRVFDCVYL NDKLLTQYTL
460 470 480 490 500
RDRRRALESA VKGVTRRLEV HPYIEARSHT EIEPALRKVI AESSEGLVLK
510 520 530 540 550
NPRSMYCLNQ RNNDWMKVKP EYMSEFGESL DCIVVGGYFG SGHRGGVHSS
560 570 580 590 600
FLCALLTDKD AKPGDPKYEH CWSFFKVGGG FSREDYAAIR GRTEGKWHNW
610 620 630 640 650
DRRRPPPFIE LGGHEQNRQH ERPDQWIRPS DSVVLECKAA SVESSDKFRS
660 670 680 690 700
TLTLRFPRFK LLRVDKRWDQ ALSIQEFLDV KSRAEKEKSE KEKEFKIEQS
710 720 730 740 750
RRKKARTTKK PLTVVGDDAV ITPYAGAVSK VFEGLTFYIM TEQVHPSKKS
760 770 780 790 800
KADLEALVKA NGGRLIQRDT TAKDLVIVAD KRLIKVASLE KRGTNNIVKP
810 820 830 840 850
IWLQDCIMQN ERDAGAPPYL LPFEPNRHMY YLHDDDQMDY EANLDDNGDS
860 870 880 890 900
YARDITDVDE MRRLLDGVEI PKSKFSRDAF LEQLEGHGED FSQFKTYMFQ
910 920 930 940 950
NVKAKFSGEV GSELRVRLAK NYVRFGGGQV ADGGDEEGVT HVVVADGQTS
960 970 980
AAKGKARVNG LARVVGLGWI EKCWEEGTRI DEERFQWG
Length:988
Mass (Da):113,531
Last modified:January 11, 2011 - v1
Checksum:i6738E9AB3B578986
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GL537210 Genomic DNA Translation: EFQ86998.1
RefSeqiXP_003304917.1, XM_003304869.1

Genome annotation databases

EnsemblFungiiEFQ86998; EFQ86998; PTT_17650
KEGGipte:PTT_17650

Similar proteinsi

Entry informationi

Entry nameiE3S4W2_PYRTT
AccessioniPrimary (citable) accession number: E3S4W2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 23, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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