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E3S4W2

- E3S4W2_PYRTT

UniProt

E3S4W2 - E3S4W2_PYRTT

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Protein

DNA ligase

Gene

PTT_17650

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_17650Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
ProteomesiUP000001067: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PANTHERiPTHR10459:SF7. PTHR10459:SF7. 1 hit.
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3S4W2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTEDTPMPDA DAIRENTLMY GHDDDLDDKY PTRPINLHKT LPFHTLFTDL
60 70 80 90 100
FNPLMETQKR KQPAGARRRV GPHGHSNMSP HEAKRNIIQR FIANWRKQVG
110 120 130 140 150
NDFYPAMRLI IPEKDRDRAM YGLKEKAIAK VLIKLTRIGK DSDDAKHMLN
160 170 180 190 200
WKLPGQLNKA SASTAGDFAG RCYEILSTRQ LKTEYSDMTI AEVNNALDRL
210 220 230 240 250
SQVGAEDEQV KIFQRFYRRM NAEEMTWLIR MILRQMKIGA TEKTFLDIWH
260 270 280 290 300
PDAETLFNIS SNLRRVCWEL FDIELRLQGE DTGLSLMQCF QPQLAQFQDK
310 320 330 340 350
VGSFEKLVTR FKGDENDDTF WIEEKLDGER MQLHMMEDPD APGGKLFGFW
360 370 380 390 400
SRKAKDYAYL YGRHFDGDEA GALTRFITDA FGENVRNIIL DGEMITWDME
410 420 430 440 450
TDHIVGFGTL KTAALSEKEN KTNKNTGQRP LFRVFDCVYL NDKLLTQYTL
460 470 480 490 500
RDRRRALESA VKGVTRRLEV HPYIEARSHT EIEPALRKVI AESSEGLVLK
510 520 530 540 550
NPRSMYCLNQ RNNDWMKVKP EYMSEFGESL DCIVVGGYFG SGHRGGVHSS
560 570 580 590 600
FLCALLTDKD AKPGDPKYEH CWSFFKVGGG FSREDYAAIR GRTEGKWHNW
610 620 630 640 650
DRRRPPPFIE LGGHEQNRQH ERPDQWIRPS DSVVLECKAA SVESSDKFRS
660 670 680 690 700
TLTLRFPRFK LLRVDKRWDQ ALSIQEFLDV KSRAEKEKSE KEKEFKIEQS
710 720 730 740 750
RRKKARTTKK PLTVVGDDAV ITPYAGAVSK VFEGLTFYIM TEQVHPSKKS
760 770 780 790 800
KADLEALVKA NGGRLIQRDT TAKDLVIVAD KRLIKVASLE KRGTNNIVKP
810 820 830 840 850
IWLQDCIMQN ERDAGAPPYL LPFEPNRHMY YLHDDDQMDY EANLDDNGDS
860 870 880 890 900
YARDITDVDE MRRLLDGVEI PKSKFSRDAF LEQLEGHGED FSQFKTYMFQ
910 920 930 940 950
NVKAKFSGEV GSELRVRLAK NYVRFGGGQV ADGGDEEGVT HVVVADGQTS
960 970 980
AAKGKARVNG LARVVGLGWI EKCWEEGTRI DEERFQWG
Length:988
Mass (Da):113,531
Last modified:January 11, 2011 - v1
Checksum:i6738E9AB3B578986
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537210 Genomic DNA. Translation: EFQ86998.1.
RefSeqiXP_003304917.1. XM_003304869.1.

Genome annotation databases

EnsemblFungiiEFQ86998; EFQ86998; PTT_17650.
GeneIDi10516960.
KEGGipte:PTT_17650.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537210 Genomic DNA. Translation: EFQ86998.1 .
RefSeqi XP_003304917.1. XM_003304869.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFQ86998 ; EFQ86998 ; PTT_17650 .
GeneIDi 10516960.
KEGGi pte:PTT_17650.

Phylogenomic databases

KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR029710. LIG4.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
PANTHERi PTHR10459:SF7. PTHR10459:SF7. 1 hit.
Pfami PF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
    Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
    Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 0-1Imported.

Entry informationi

Entry nameiE3S4W2_PYRTT
AccessioniPrimary (citable) accession number: E3S4W2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 29, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3