SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E3S4W2

- E3S4W2_PYRTT

UniProt

E3S4W2 - E3S4W2_PYRTT

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene
PTT_17650
Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_17650Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
ProteomesiUP000001067: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10777.
OrthoDBiEOG7QC84G.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProiIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTiSM00292. BRCT. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3S4W2-1 [UniParc]FASTAAdd to Basket

« Hide

MTEDTPMPDA DAIRENTLMY GHDDDLDDKY PTRPINLHKT LPFHTLFTDL    50
FNPLMETQKR KQPAGARRRV GPHGHSNMSP HEAKRNIIQR FIANWRKQVG 100
NDFYPAMRLI IPEKDRDRAM YGLKEKAIAK VLIKLTRIGK DSDDAKHMLN 150
WKLPGQLNKA SASTAGDFAG RCYEILSTRQ LKTEYSDMTI AEVNNALDRL 200
SQVGAEDEQV KIFQRFYRRM NAEEMTWLIR MILRQMKIGA TEKTFLDIWH 250
PDAETLFNIS SNLRRVCWEL FDIELRLQGE DTGLSLMQCF QPQLAQFQDK 300
VGSFEKLVTR FKGDENDDTF WIEEKLDGER MQLHMMEDPD APGGKLFGFW 350
SRKAKDYAYL YGRHFDGDEA GALTRFITDA FGENVRNIIL DGEMITWDME 400
TDHIVGFGTL KTAALSEKEN KTNKNTGQRP LFRVFDCVYL NDKLLTQYTL 450
RDRRRALESA VKGVTRRLEV HPYIEARSHT EIEPALRKVI AESSEGLVLK 500
NPRSMYCLNQ RNNDWMKVKP EYMSEFGESL DCIVVGGYFG SGHRGGVHSS 550
FLCALLTDKD AKPGDPKYEH CWSFFKVGGG FSREDYAAIR GRTEGKWHNW 600
DRRRPPPFIE LGGHEQNRQH ERPDQWIRPS DSVVLECKAA SVESSDKFRS 650
TLTLRFPRFK LLRVDKRWDQ ALSIQEFLDV KSRAEKEKSE KEKEFKIEQS 700
RRKKARTTKK PLTVVGDDAV ITPYAGAVSK VFEGLTFYIM TEQVHPSKKS 750
KADLEALVKA NGGRLIQRDT TAKDLVIVAD KRLIKVASLE KRGTNNIVKP 800
IWLQDCIMQN ERDAGAPPYL LPFEPNRHMY YLHDDDQMDY EANLDDNGDS 850
YARDITDVDE MRRLLDGVEI PKSKFSRDAF LEQLEGHGED FSQFKTYMFQ 900
NVKAKFSGEV GSELRVRLAK NYVRFGGGQV ADGGDEEGVT HVVVADGQTS 950
AAKGKARVNG LARVVGLGWI EKCWEEGTRI DEERFQWG 988
Length:988
Mass (Da):113,531
Last modified:January 11, 2011 - v1
Checksum:i6738E9AB3B578986
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537210 Genomic DNA. Translation: EFQ86998.1.
RefSeqiXP_003304917.1. XM_003304869.1.

Genome annotation databases

EnsemblFungiiEFQ86998; EFQ86998; PTT_17650.
GeneIDi10516960.
KEGGipte:PTT_17650.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537210 Genomic DNA. Translation: EFQ86998.1 .
RefSeqi XP_003304917.1. XM_003304869.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFQ86998 ; EFQ86998 ; PTT_17650 .
GeneIDi 10516960.
KEGGi pte:PTT_17650.

Phylogenomic databases

KOi K10777.
OrthoDBi EOG7QC84G.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.40.50.10190. 2 hits.
InterProi IPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF00533. BRCT. 1 hit.
PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SMARTi SM00292. BRCT. 2 hits.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 2 hits.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
    Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
    Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 0-1Imported.

Entry informationi

Entry nameiE3S4W2_PYRTT
AccessioniPrimary (citable) accession number: E3S4W2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi