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E3S3V7

- E3S3V7_PYRTT

UniProt

E3S3V7 - E3S3V7_PYRTT

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Protein

DNA ligase

Gene

PTT_17200

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_17200Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
ProteomesiUP000001067: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3S3V7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPPKQATLGK FFGKANGDGA KQQSKLSFST KPRPVKKEVP QSSPEDVKKE
60 70 80 90 100
HKDEVDSDAD VKAPVKEEVE ADADADAMEV DSTTSETGKK RQIKEGEEAE
110 120 130 140 150
SEEEPPSKRQ RRKPSEEKEK PKKKTAVKPK AEKSPAKSKK ATAKSSSPEP
160 170 180 190 200
EDEDVSAPTK VAKGKKKAAA KPKAAEVDDG EAAAPAKVAK GKKKEIEKSP
210 220 230 240 250
APAEDEVDSN KEEEDVLSSE EEEVKVKARK QVQTTLASNT KDPYPDWKPG
260 270 280 290 300
EPVPYAALCT TFSKIEMTTK RLEILAHCSL FLRQVLRLTP KDMLPTVMLM
310 320 330 340 350
VNKLAADYAG IELGIGESLI MKAVSESTGR NLQQIKTDQN EIGDLGLVAA
360 370 380 390 400
KSRSKQPTMF KPKALTVEGV RKGLMGIATV EGQGAQGRKV DGIKKLLSAA
410 420 430 440 450
DAHNSGKAID IDKDKGGPSE AKFIVRTLEG KLRLGLAEKT VVVAVAQAMI
460 470 480 490 500
FHEMSLEGKT PSTTDLGKAE AMLKTVYSEL PSYEVIIPAM LEHGIMNLRE
510 520 530 540 550
NCRLQPGVPL KPMLAKPTKS ITEVLDRFEG KDFTCEYKYD GERAQIHFVA
560 570 580 590 600
HDADMELATA APTAGRSDRG VSNIFSRNSE DLSKKYPDIL AKLPTWVKEG
610 620 630 640 650
TKSFVLDCET VAWDMVEKKV LPFQQLMTRK RKDVKVEDVK VKVCVFAFDL
660 670 680 690 700
LYLNGEALVT KSFRERREHL NEAFIPVEGE FALAKFGNTN ELEEIQTLLE
710 720 730 740 750
DSVKEGCEGL MVKMLDGPES FYEPSKRSQN WLKVKKDYLA GVGDSLDLVV
760 770 780 790 800
LGAYYGKGKR TSWYGAFLLA CYNPKTEKYE TVCNIGTGFS EVILESLHKT
810 820 830 840 850
LSEIVIDRPK PFYTHSTGNK DQPDVWFEPR HVWEVKTADL TLSPRYKAAA
860 870 880 890 900
DEVGGGGKGV SLRFPRFIKE RDDKKPDEAS SSRMIAEMYQ RQESVGKNKG

PSVDDDFEY
Length:909
Mass (Da):100,499
Last modified:January 11, 2011 - v1
Checksum:i31D80B2A2CF41DFA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537060 Genomic DNA. Translation: EFQ87336.1.
RefSeqiXP_003304562.1. XM_003304514.1.

Genome annotation databases

EnsemblFungiiEFQ87336; EFQ87336; PTT_17200.
GeneIDi10516605.
KEGGipte:PTT_17200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537060 Genomic DNA. Translation: EFQ87336.1 .
RefSeqi XP_003304562.1. XM_003304514.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFQ87336 ; EFQ87336 ; PTT_17200 .
GeneIDi 10516605.
KEGGi pte:PTT_17200.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
    Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
    Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 0-1Imported.

Entry informationi

Entry nameiE3S3V7_PYRTT
AccessioniPrimary (citable) accession number: E3S3V7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 29, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3