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E3S3V7

- E3S3V7_PYRTT

UniProt

E3S3V7 - E3S3V7_PYRTT

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Protein
DNA ligase
Gene
PTT_17200
Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_17200Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
ProteomesiUP000001067: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3S3V7-1 [UniParc]FASTAAdd to Basket

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MPPKQATLGK FFGKANGDGA KQQSKLSFST KPRPVKKEVP QSSPEDVKKE    50
HKDEVDSDAD VKAPVKEEVE ADADADAMEV DSTTSETGKK RQIKEGEEAE 100
SEEEPPSKRQ RRKPSEEKEK PKKKTAVKPK AEKSPAKSKK ATAKSSSPEP 150
EDEDVSAPTK VAKGKKKAAA KPKAAEVDDG EAAAPAKVAK GKKKEIEKSP 200
APAEDEVDSN KEEEDVLSSE EEEVKVKARK QVQTTLASNT KDPYPDWKPG 250
EPVPYAALCT TFSKIEMTTK RLEILAHCSL FLRQVLRLTP KDMLPTVMLM 300
VNKLAADYAG IELGIGESLI MKAVSESTGR NLQQIKTDQN EIGDLGLVAA 350
KSRSKQPTMF KPKALTVEGV RKGLMGIATV EGQGAQGRKV DGIKKLLSAA 400
DAHNSGKAID IDKDKGGPSE AKFIVRTLEG KLRLGLAEKT VVVAVAQAMI 450
FHEMSLEGKT PSTTDLGKAE AMLKTVYSEL PSYEVIIPAM LEHGIMNLRE 500
NCRLQPGVPL KPMLAKPTKS ITEVLDRFEG KDFTCEYKYD GERAQIHFVA 550
HDADMELATA APTAGRSDRG VSNIFSRNSE DLSKKYPDIL AKLPTWVKEG 600
TKSFVLDCET VAWDMVEKKV LPFQQLMTRK RKDVKVEDVK VKVCVFAFDL 650
LYLNGEALVT KSFRERREHL NEAFIPVEGE FALAKFGNTN ELEEIQTLLE 700
DSVKEGCEGL MVKMLDGPES FYEPSKRSQN WLKVKKDYLA GVGDSLDLVV 750
LGAYYGKGKR TSWYGAFLLA CYNPKTEKYE TVCNIGTGFS EVILESLHKT 800
LSEIVIDRPK PFYTHSTGNK DQPDVWFEPR HVWEVKTADL TLSPRYKAAA 850
DEVGGGGKGV SLRFPRFIKE RDDKKPDEAS SSRMIAEMYQ RQESVGKNKG 900
PSVDDDFEY 909
Length:909
Mass (Da):100,499
Last modified:January 11, 2011 - v1
Checksum:i31D80B2A2CF41DFA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537060 Genomic DNA. Translation: EFQ87336.1.
RefSeqiXP_003304562.1. XM_003304514.1.

Genome annotation databases

EnsemblFungiiEFQ87336; EFQ87336; PTT_17200.
GeneIDi10516605.
KEGGipte:PTT_17200.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL537060 Genomic DNA. Translation: EFQ87336.1 .
RefSeqi XP_003304562.1. XM_003304514.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFQ87336 ; EFQ87336 ; PTT_17200 .
GeneIDi 10516605.
KEGGi pte:PTT_17200.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
    Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
    Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 0-1Imported.

Entry informationi

Entry nameiE3S3V7_PYRTT
AccessioniPrimary (citable) accession number: E3S3V7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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