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E3S3V7 (E3S3V7_PYRTT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length909 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
E3S3V7 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 31D80B2A2CF41DFA

FASTA909100,499
        10         20         30         40         50         60 
MPPKQATLGK FFGKANGDGA KQQSKLSFST KPRPVKKEVP QSSPEDVKKE HKDEVDSDAD 

        70         80         90        100        110        120 
VKAPVKEEVE ADADADAMEV DSTTSETGKK RQIKEGEEAE SEEEPPSKRQ RRKPSEEKEK 

       130        140        150        160        170        180 
PKKKTAVKPK AEKSPAKSKK ATAKSSSPEP EDEDVSAPTK VAKGKKKAAA KPKAAEVDDG 

       190        200        210        220        230        240 
EAAAPAKVAK GKKKEIEKSP APAEDEVDSN KEEEDVLSSE EEEVKVKARK QVQTTLASNT 

       250        260        270        280        290        300 
KDPYPDWKPG EPVPYAALCT TFSKIEMTTK RLEILAHCSL FLRQVLRLTP KDMLPTVMLM 

       310        320        330        340        350        360 
VNKLAADYAG IELGIGESLI MKAVSESTGR NLQQIKTDQN EIGDLGLVAA KSRSKQPTMF 

       370        380        390        400        410        420 
KPKALTVEGV RKGLMGIATV EGQGAQGRKV DGIKKLLSAA DAHNSGKAID IDKDKGGPSE 

       430        440        450        460        470        480 
AKFIVRTLEG KLRLGLAEKT VVVAVAQAMI FHEMSLEGKT PSTTDLGKAE AMLKTVYSEL 

       490        500        510        520        530        540 
PSYEVIIPAM LEHGIMNLRE NCRLQPGVPL KPMLAKPTKS ITEVLDRFEG KDFTCEYKYD 

       550        560        570        580        590        600 
GERAQIHFVA HDADMELATA APTAGRSDRG VSNIFSRNSE DLSKKYPDIL AKLPTWVKEG 

       610        620        630        640        650        660 
TKSFVLDCET VAWDMVEKKV LPFQQLMTRK RKDVKVEDVK VKVCVFAFDL LYLNGEALVT 

       670        680        690        700        710        720 
KSFRERREHL NEAFIPVEGE FALAKFGNTN ELEEIQTLLE DSVKEGCEGL MVKMLDGPES 

       730        740        750        760        770        780 
FYEPSKRSQN WLKVKKDYLA GVGDSLDLVV LGAYYGKGKR TSWYGAFLLA CYNPKTEKYE 

       790        800        810        820        830        840 
TVCNIGTGFS EVILESLHKT LSEIVIDRPK PFYTHSTGNK DQPDVWFEPR HVWEVKTADL 

       850        860        870        880        890        900 
TLSPRYKAAA DEVGGGGKGV SLRFPRFIKE RDDKKPDEAS SSRMIAEMYQ RQESVGKNKG 


PSVDDDFEY 

« Hide

References

[1]"A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 0-1 EMBL EFQ87336.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL537060 Genomic DNA. Translation: EFQ87336.1.
RefSeqXP_003304562.1. XM_003304514.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiEFQ87336; EFQ87336; PTT_17200.
GeneID10516605.
KEGGpte:PTT_17200.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 2 hits.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3S3V7_PYRTT
AccessionPrimary (citable) accession number: E3S3V7
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)