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E3S3V7

- E3S3V7_PYRTT

UniProt

E3S3V7 - E3S3V7_PYRTT

Protein

DNA ligase

Gene

PTT_17200

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PTT_17200Imported
    OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
    Taxonomic identifieri861557 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
    ProteomesiUP000001067: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 2 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3S3V7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPPKQATLGK FFGKANGDGA KQQSKLSFST KPRPVKKEVP QSSPEDVKKE    50
    HKDEVDSDAD VKAPVKEEVE ADADADAMEV DSTTSETGKK RQIKEGEEAE 100
    SEEEPPSKRQ RRKPSEEKEK PKKKTAVKPK AEKSPAKSKK ATAKSSSPEP 150
    EDEDVSAPTK VAKGKKKAAA KPKAAEVDDG EAAAPAKVAK GKKKEIEKSP 200
    APAEDEVDSN KEEEDVLSSE EEEVKVKARK QVQTTLASNT KDPYPDWKPG 250
    EPVPYAALCT TFSKIEMTTK RLEILAHCSL FLRQVLRLTP KDMLPTVMLM 300
    VNKLAADYAG IELGIGESLI MKAVSESTGR NLQQIKTDQN EIGDLGLVAA 350
    KSRSKQPTMF KPKALTVEGV RKGLMGIATV EGQGAQGRKV DGIKKLLSAA 400
    DAHNSGKAID IDKDKGGPSE AKFIVRTLEG KLRLGLAEKT VVVAVAQAMI 450
    FHEMSLEGKT PSTTDLGKAE AMLKTVYSEL PSYEVIIPAM LEHGIMNLRE 500
    NCRLQPGVPL KPMLAKPTKS ITEVLDRFEG KDFTCEYKYD GERAQIHFVA 550
    HDADMELATA APTAGRSDRG VSNIFSRNSE DLSKKYPDIL AKLPTWVKEG 600
    TKSFVLDCET VAWDMVEKKV LPFQQLMTRK RKDVKVEDVK VKVCVFAFDL 650
    LYLNGEALVT KSFRERREHL NEAFIPVEGE FALAKFGNTN ELEEIQTLLE 700
    DSVKEGCEGL MVKMLDGPES FYEPSKRSQN WLKVKKDYLA GVGDSLDLVV 750
    LGAYYGKGKR TSWYGAFLLA CYNPKTEKYE TVCNIGTGFS EVILESLHKT 800
    LSEIVIDRPK PFYTHSTGNK DQPDVWFEPR HVWEVKTADL TLSPRYKAAA 850
    DEVGGGGKGV SLRFPRFIKE RDDKKPDEAS SSRMIAEMYQ RQESVGKNKG 900
    PSVDDDFEY 909
    Length:909
    Mass (Da):100,499
    Last modified:January 11, 2011 - v1
    Checksum:i31D80B2A2CF41DFA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL537060 Genomic DNA. Translation: EFQ87336.1.
    RefSeqiXP_003304562.1. XM_003304514.1.

    Genome annotation databases

    EnsemblFungiiEFQ87336; EFQ87336; PTT_17200.
    GeneIDi10516605.
    KEGGipte:PTT_17200.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL537060 Genomic DNA. Translation: EFQ87336.1 .
    RefSeqi XP_003304562.1. XM_003304514.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EFQ87336 ; EFQ87336 ; PTT_17200 .
    GeneIDi 10516605.
    KEGGi pte:PTT_17200.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 2 hits.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
      Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
      Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 0-1Imported.

    Entry informationi

    Entry nameiE3S3V7_PYRTT
    AccessioniPrimary (citable) accession number: E3S3V7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3