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E3RRT9 (E3RRT9_PYRTT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length873 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
E3RRT9 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: B005CFD75A9D5A0C

FASTA87397,054
        10         20         30         40         50         60 
MNSPSKRRKK NDGSGKPVRS LDYFFAKQTA KATPKDAPTN TGASAEEDTT GLTDEQLARK 

        70         80         90        100        110        120 
LQEQFDKEDQ QRGQDAEPAS SNELYTDPGK SMTDVTAKND VDNVEPSNVP LPNRTIQEAP 

       130        140        150        160        170        180 
ESAPPKQKNT LSLQSTASEE DTITANIPFD QSPLEFDPQD YIPDLQKHWV ADGGHATYAL 

       190        200        210        220        230        240 
LTRCFILVNS TTSRIKIVDT LVNLLRTIIE SDPSSLLPAV WLATNAISPP YIDLELGLGG 

       250        260        270        280        290        300 
SAISKALKKV CGLDNAGLKV LNNKYGDAGD VAFEAKKKQS FTLRKPKPLT IKSVFESLVK 

       310        320        330        340        350        360 
IANSKGHGSV ENKQRIVERL VQDARGAEES RYIVRTLVQH LRIGAVKTTM LIALSRAFML 

       370        380        390        400        410        420 
SKPLGAEFEI RDRKDMAKLK KEELTEIYSR NEEIVKACFA RRPNYNDLIP VLLEIGVCEE 

       430        440        450        460        470        480 
LLVRCGLTLH IPLRPMLGSI TRDMGEMLTK LQGRDFACEY KYDGQRAQVH CDDKGKVTIF 

       490        500        510        520        530        540 
SRHLEVMTDK YPDLVALVPK IRGEGVSSFI LEGEVVAVDR ESGDLKTFQT LANRARKDVV 

       550        560        570        580        590        600 
IGAVTIDVCL FAFDLMYLNG EELLNRPFRE RRSLLKSLFV EIPHHFTWVK SLDATSADVE 

       610        620        630        640        650        660 
AVQSFFQSAL DIKCEGIMVK MLDNNPPIPD LVPDPDQPTT PKKPKKKAAK SSKSSAVKDD 

       670        680        690        700        710        720 
SSTTTTKPSR RKPLLSTYEP DKRLDAWLKV KKDYSTTSET LDLIPIAAFH GSGRKAAWWS 

       730        740        750        760        770        780 
PILLAVRNAE TGQLDAVTKC MSGFTDAFYR ANRKKYDPDD PECTVVLGQK PSFVRYNGGA 

       790        800        810        820        830        840 
GTPAVWFEPH EVWEVAFADL TLSPTYTAAI GLVSEERGLS TRFPRFLRVR EDKGVDEATE 

       850        860        870 
AGELAALYRK QEAKATLTKD EGEQQDIVEE EED 

« Hide

References

[1]"A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 0-1 EMBL EFQ91558.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GL534730 Genomic DNA. Translation: EFQ91558.1.
RefSeqXP_003300344.1. XM_003300296.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiEFQ91558; EFQ91558; PTT_11577.
GeneID10518810.
KEGGpte:PTT_11577.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3RRT9_PYRTT
AccessionPrimary (citable) accession number: E3RRT9
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)