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E3RRT9

- E3RRT9_PYRTT

UniProt

E3RRT9 - E3RRT9_PYRTT

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Protein

DNA ligase

Gene
PTT_11577
Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PTT_11577Imported
OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Taxonomic identifieri861557 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
ProteomesiUP000001067: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3RRT9-1 [UniParc]FASTAAdd to Basket

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MNSPSKRRKK NDGSGKPVRS LDYFFAKQTA KATPKDAPTN TGASAEEDTT    50
GLTDEQLARK LQEQFDKEDQ QRGQDAEPAS SNELYTDPGK SMTDVTAKND 100
VDNVEPSNVP LPNRTIQEAP ESAPPKQKNT LSLQSTASEE DTITANIPFD 150
QSPLEFDPQD YIPDLQKHWV ADGGHATYAL LTRCFILVNS TTSRIKIVDT 200
LVNLLRTIIE SDPSSLLPAV WLATNAISPP YIDLELGLGG SAISKALKKV 250
CGLDNAGLKV LNNKYGDAGD VAFEAKKKQS FTLRKPKPLT IKSVFESLVK 300
IANSKGHGSV ENKQRIVERL VQDARGAEES RYIVRTLVQH LRIGAVKTTM 350
LIALSRAFML SKPLGAEFEI RDRKDMAKLK KEELTEIYSR NEEIVKACFA 400
RRPNYNDLIP VLLEIGVCEE LLVRCGLTLH IPLRPMLGSI TRDMGEMLTK 450
LQGRDFACEY KYDGQRAQVH CDDKGKVTIF SRHLEVMTDK YPDLVALVPK 500
IRGEGVSSFI LEGEVVAVDR ESGDLKTFQT LANRARKDVV IGAVTIDVCL 550
FAFDLMYLNG EELLNRPFRE RRSLLKSLFV EIPHHFTWVK SLDATSADVE 600
AVQSFFQSAL DIKCEGIMVK MLDNNPPIPD LVPDPDQPTT PKKPKKKAAK 650
SSKSSAVKDD SSTTTTKPSR RKPLLSTYEP DKRLDAWLKV KKDYSTTSET 700
LDLIPIAAFH GSGRKAAWWS PILLAVRNAE TGQLDAVTKC MSGFTDAFYR 750
ANRKKYDPDD PECTVVLGQK PSFVRYNGGA GTPAVWFEPH EVWEVAFADL 800
TLSPTYTAAI GLVSEERGLS TRFPRFLRVR EDKGVDEATE AGELAALYRK 850
QEAKATLTKD EGEQQDIVEE EED 873
Length:873
Mass (Da):97,054
Last modified:January 11, 2011 - v1
Checksum:iB005CFD75A9D5A0C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL534730 Genomic DNA. Translation: EFQ91558.1.
RefSeqiXP_003300344.1. XM_003300296.1.

Genome annotation databases

EnsemblFungiiEFQ91558; EFQ91558; PTT_11577.
GeneIDi10518810.
KEGGipte:PTT_11577.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
GL534730 Genomic DNA. Translation: EFQ91558.1 .
RefSeqi XP_003300344.1. XM_003300296.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFQ91558 ; EFQ91558 ; PTT_11577 .
GeneIDi 10518810.
KEGGi pte:PTT_11577.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
    Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
    Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 0-1Imported.

Entry informationi

Entry nameiE3RRT9_PYRTT
AccessioniPrimary (citable) accession number: E3RRT9
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi