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E3RRT9

- E3RRT9_PYRTT

UniProt

E3RRT9 - E3RRT9_PYRTT

Protein

DNA ligase

Gene

PTT_11577

Organism
Pyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PTT_11577Imported
    OrganismiPyrenophora teres f. teres (strain 0-1) (Barley net blotch fungus) (Drechslera teres f. teres)Imported
    Taxonomic identifieri861557 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesPleosporomycetidaePleosporalesPleosporineaePleosporaceaePyrenophora
    ProteomesiUP000001067: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3RRT9-1 [UniParc]FASTAAdd to Basket

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    MNSPSKRRKK NDGSGKPVRS LDYFFAKQTA KATPKDAPTN TGASAEEDTT    50
    GLTDEQLARK LQEQFDKEDQ QRGQDAEPAS SNELYTDPGK SMTDVTAKND 100
    VDNVEPSNVP LPNRTIQEAP ESAPPKQKNT LSLQSTASEE DTITANIPFD 150
    QSPLEFDPQD YIPDLQKHWV ADGGHATYAL LTRCFILVNS TTSRIKIVDT 200
    LVNLLRTIIE SDPSSLLPAV WLATNAISPP YIDLELGLGG SAISKALKKV 250
    CGLDNAGLKV LNNKYGDAGD VAFEAKKKQS FTLRKPKPLT IKSVFESLVK 300
    IANSKGHGSV ENKQRIVERL VQDARGAEES RYIVRTLVQH LRIGAVKTTM 350
    LIALSRAFML SKPLGAEFEI RDRKDMAKLK KEELTEIYSR NEEIVKACFA 400
    RRPNYNDLIP VLLEIGVCEE LLVRCGLTLH IPLRPMLGSI TRDMGEMLTK 450
    LQGRDFACEY KYDGQRAQVH CDDKGKVTIF SRHLEVMTDK YPDLVALVPK 500
    IRGEGVSSFI LEGEVVAVDR ESGDLKTFQT LANRARKDVV IGAVTIDVCL 550
    FAFDLMYLNG EELLNRPFRE RRSLLKSLFV EIPHHFTWVK SLDATSADVE 600
    AVQSFFQSAL DIKCEGIMVK MLDNNPPIPD LVPDPDQPTT PKKPKKKAAK 650
    SSKSSAVKDD SSTTTTKPSR RKPLLSTYEP DKRLDAWLKV KKDYSTTSET 700
    LDLIPIAAFH GSGRKAAWWS PILLAVRNAE TGQLDAVTKC MSGFTDAFYR 750
    ANRKKYDPDD PECTVVLGQK PSFVRYNGGA GTPAVWFEPH EVWEVAFADL 800
    TLSPTYTAAI GLVSEERGLS TRFPRFLRVR EDKGVDEATE AGELAALYRK 850
    QEAKATLTKD EGEQQDIVEE EED 873
    Length:873
    Mass (Da):97,054
    Last modified:January 11, 2011 - v1
    Checksum:iB005CFD75A9D5A0C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL534730 Genomic DNA. Translation: EFQ91558.1.
    RefSeqiXP_003300344.1. XM_003300296.1.

    Genome annotation databases

    EnsemblFungiiEFQ91558; EFQ91558; PTT_11577.
    GeneIDi10518810.
    KEGGipte:PTT_11577.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GL534730 Genomic DNA. Translation: EFQ91558.1 .
    RefSeqi XP_003300344.1. XM_003300296.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EFQ91558 ; EFQ91558 ; PTT_11577 .
    GeneIDi 10518810.
    KEGGi pte:PTT_11577.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A first genome assembly of the barley fungal pathogen Pyrenophora teres f. teres."
      Ellwood S.R., Liu Z., Syme R.A., Lai Z., Hane J.K., Keiper F., Moffat C.S., Oliver R.P., Friesen T.L.
      Genome Biol. 11:R109.1-R109.14(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 0-1Imported.

    Entry informationi

    Entry nameiE3RRT9_PYRTT
    AccessioniPrimary (citable) accession number: E3RRT9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3