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E3PTX2

- E3PTX2_CLOSD

UniProt

E3PTX2 - E3PTX2_CLOSD

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Protein
Elongation factor Tu
Gene
tufB, tuf, CLOST_2206, CLOST_2219
Organism
Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity.UniRule annotation

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi19 – 268GTP By similarityUniRule annotation
Nucleotide bindingi82 – 865GTP By similarityUniRule annotation
Nucleotide bindingi137 – 1404GTP By similarityUniRule annotation

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-HAMAP
  2. GTPase activity Source: InterPro
  3. translation elongation factor activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Elongation factorUniRule annotationImported

Keywords - Biological processi

Protein biosynthesis

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciCSTI499177:GJE9-2272-MONOMER.
CSTI499177:GJE9-2286-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Elongation factor TuUniRule annotation
Short name:
EF-TuUniRule annotation
Gene namesi
Name:tufBImported
Synonyms:tufUniRule annotation
Ordered Locus Names:CLOST_2206Imported, CLOST_2219Imported
OrganismiClostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654)
Taxonomic identifieri499177 [NCBI]
Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesPeptostreptococcaceaePeptoclostridium
ProteomesiUP000007041: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000229290.
KOiK02358.
OMAiGTEMCMP.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
HAMAPiMF_00118_B. EF_Tu_B.
InterProiIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamiPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSiPR00315. ELONGATNFCT.
SUPFAMiSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEiPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3PTX2-1 [UniParc]FASTAAdd to Basket

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MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKTLHARY GFGAAVDFEN    50
IDKAPEERER GITISTAHVE YETPNRHYAH VDCPGHADYV KNMITGAAQM 100
DGAILVCSAA DGPMPQTREH ILLSRQVGVP YIVVFLNKCD MVDDEELLEL 150
VEMEVRDLLN EYEFPGDDTP IIRGSALKAL EDPASEWGDK IVELFEQIDS 200
YIPEPERDID KPFLMPVEDV FSITGRGTVA TGRVERGILK VQDEVEIVGL 250
TEEARKVVVT GVEMFRKLLD QAQAGDNIGA LLRGVTRDDI ERGQVLAKSG 300
TIKPRTKFTA EIYVLKKEEG GRHTPFFKGY RPQFYFRTTD VTGDITLPDG 350
VEMVMPGDNI TISVELITPI AMEEGLRFAI REGGRTVGAG VVATIVE 397
Length:397
Mass (Da):43,882
Last modified:January 11, 2011 - v1
Checksum:i77425217445FA464
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565809 Genomic DNA. Translation: CBH22326.1.
FP565809 Genomic DNA. Translation: CBH22339.1.
RefSeqiYP_003937231.1. NC_014614.1.
YP_003937244.1. NC_014614.1.

Genome annotation databases

EnsemblBacteriaiCBH22326; CBH22326; CLOST_2206.
CBH22339; CBH22339; CLOST_2219.
GeneIDi9855366.
9856392.
KEGGicst:CLOST_2206.
cst:CLOST_2219.
PATRICi42275041. VBICloSti32817_2192.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FP565809 Genomic DNA. Translation: CBH22326.1 .
FP565809 Genomic DNA. Translation: CBH22339.1 .
RefSeqi YP_003937231.1. NC_014614.1.
YP_003937244.1. NC_014614.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBH22326 ; CBH22326 ; CLOST_2206 .
CBH22339 ; CBH22339 ; CLOST_2219 .
GeneIDi 9855366.
9856392.
KEGGi cst:CLOST_2206.
cst:CLOST_2219.
PATRICi 42275041. VBICloSti32817_2192.

Phylogenomic databases

HOGENOMi HOG000229290.
KOi K02358.
OMAi GTEMCMP.

Enzyme and pathway databases

BioCyci CSTI499177:GJE9-2272-MONOMER.
CSTI499177:GJE9-2286-MONOMER.

Family and domain databases

Gene3Di 3.40.50.300. 1 hit.
HAMAPi MF_00118_B. EF_Tu_B.
InterProi IPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view ]
Pfami PF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view ]
PRINTSi PR00315. ELONGATNFCT.
SUPFAMi SSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsi TIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEi PS00301. EFACTOR_GTP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence."
    Fonknechten N., Chaussonnerie S., Tricot S., Lajus A., Andreesen J.R., Perchat N., Pelletier E., Gouyvenoux M., Barbe V., Salanoubat M., Le Paslier D., Weissenbach J., Cohen G.N., Kreimeyer A.
    BMC Genomics 11:555-555(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654.
  2. Genoscope - CEA
    Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: DSM 519Imported.

Entry informationi

Entry nameiE3PTX2_CLOSD
AccessioniPrimary (citable) accession number: E3PTX2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: September 3, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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