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E3PTX2 (E3PTX2_CLOSD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufB EMBL CBH22326.1
Synonyms:tuf HAMAP-Rule MF_00118
Ordered Locus Names:CLOST_2206 EMBL CBH22326.1, CLOST_2219 EMBL CBH22339.1
OrganismClostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) [Complete proteome] [HAMAP]
Taxonomic identifier499177 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Peptostreptococcaceae ›

Protein attributes

Sequence length397 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding82 – 865GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding137 – 1404GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E3PTX2 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 77425217445FA464

FASTA39743,882
        10         20         30         40         50         60 
MAKAKFERTK PHVNIGTIGH VDHGKTTLTA AITKTLHARY GFGAAVDFEN IDKAPEERER 

        70         80         90        100        110        120 
GITISTAHVE YETPNRHYAH VDCPGHADYV KNMITGAAQM DGAILVCSAA DGPMPQTREH 

       130        140        150        160        170        180 
ILLSRQVGVP YIVVFLNKCD MVDDEELLEL VEMEVRDLLN EYEFPGDDTP IIRGSALKAL 

       190        200        210        220        230        240 
EDPASEWGDK IVELFEQIDS YIPEPERDID KPFLMPVEDV FSITGRGTVA TGRVERGILK 

       250        260        270        280        290        300 
VQDEVEIVGL TEEARKVVVT GVEMFRKLLD QAQAGDNIGA LLRGVTRDDI ERGQVLAKSG 

       310        320        330        340        350        360 
TIKPRTKFTA EIYVLKKEEG GRHTPFFKGY RPQFYFRTTD VTGDITLPDG VEMVMPGDNI 

       370        380        390 
TISVELITPI AMEEGLRFAI REGGRTVGAG VVATIVE

« Hide

References

« Hide 'large scale' references
[1]"Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence."
Fonknechten N., Chaussonnerie S., Tricot S., Lajus A., Andreesen J.R., Perchat N., Pelletier E., Gouyvenoux M., Barbe V., Salanoubat M., Le Paslier D., Weissenbach J., Cohen G.N., Kreimeyer A.
BMC Genomics 11:555-555(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654.
[2]Genoscope - CEA
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: DSM 519 EMBL CBH22326.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FP565809 Genomic DNA. Translation: CBH22326.1.
FP565809 Genomic DNA. Translation: CBH22339.1.
RefSeqYP_003937231.1. NC_014614.1.
YP_003937244.1. NC_014614.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBH22326; CBH22326; CLOST_2206.
CBH22339; CBH22339; CLOST_2219.
GeneID9855366.
9856392.
KEGGcst:CLOST_2206.
cst:CLOST_2219.
PATRIC42275041. VBICloSti32817_2192.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.

Enzyme and pathway databases

BioCycCSTI499177:GJE9-2272-MONOMER.
CSTI499177:GJE9-2286-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3PTX2_CLOSD
AccessionPrimary (citable) accession number: E3PTX2
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info