Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

E3PFJ1 (E3PFJ1_ECOH1) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:ETEC_0427 EMBL CBI99932.1
OrganismEscherichia coli O78:H11 (strain H10407 / ETEC) [Complete proteome] [HAMAP] EMBL CBI99932.1
Taxonomic identifier316401 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length870 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcell adhesion

Inferred from electronic annotation. Source: InterPro

   Cellular_componentouter membrane

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E3PFJ1 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: FB50566D830BDE4F

FASTA87093,304
        10         20         30         40         50         60 
MLPMGESSDG HYVYQFSEYG TDRVIDDNWH DGDVFTLNIA NSTIDDDYEG LYFTDSYLNG 

        70         80         90        100        110        120 
DVTKYTNETF RTPAGEGEEY AGLFANGGVG LGLAVNLDVE SNINISNNSR VAGISLTQGN 

       130        140        150        160        170        180 
TVNNTYTTES HTWDNNISVI DSTVTSGSVT TLEDSGFYGN SAEPSDYSGK GGANDVALYF 

       190        200        210        220        230        240 
SDSAASNYFM KNNVYFSNST LLGDVVFAST FNANFYPHGH DSNADGVLDT NGGWADDSLN 

       250        260        270        280        290        300 
VDELNITLDN GSKWVGSATT SANVDVDSTV STDWYDVTGN SLYPGVVAED NAWGRTIDNQ 

       310        320        330        340        350        360 
VFQSGVFNVT LNNGSEWNTV NASNIDTLAI NNGSEVNVTN SSLLSDTIGL TNGSSLNIGE 

       370        380        390        400        410        420 
DGEVATDHLT VDSYSTVNLT ESTGWNNYSN LYANTITVTN GGVLDVNVDQ FDTEAFRTDK 

       430        440        450        460        470        480 
LELTSGNIAD HNGNVVSGVF NIHSSDYVLN ADLVNDRTWD TSKSNYGYGI VAMNSDGHLT 

       490        500        510        520        530        540 
INGNGDVDNG TELDNSSVDN VVAATGNYKV RIDNATGAGS IADYNGNELI YVNDKNSNAT 

       550        560        570        580        590        600 
FSAANKADLG AYTYQAEQRG NTVVLQQMEL TDYANMALSI PSANTNIWNL EQDTVGTRLT 

       610        620        630        640        650        660 
NSRHGLADNG GAWVSYFGGN FNGDNGTINY DQDVNGIMVG VDTKIDGNNA KWIVGAAAGF 

       670        680        690        700        710        720 
AKGDMNDRSG QVDQDSQTAY IYSSAHFANN VFVDGSLSYS HFNNDLSATM SNGTYVDGST 

       730        740        750        760        770        780 
NSDAWGFGLK AGYDFKLGDA GYVTPYGSIS GLFQSGDDYQ LSNDMKVDGQ SYDSMRYELG 

       790        800        810        820        830        840 
VDAGYTFTYS EDQALTPYFK LAYVYDDSNN DNDVNGDSID NGTEGSAVRV GLGTQFSFTK 

       850        860        870 
NFSAYTDANY LGGGDVDQDW SANVGVKYTW 

« Hide

References

[1]"A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407."
Crossman L.C., Chaudhuri R.R., Beatson S.A., Wells T.J., Desvaux M., Cunningham A.F., Petty N.K., Mahon V., Brinkley C., Hobman J.L., Savarino S.J., Turner S.M., Pallen M.J., Penn C.W., Parkhill J., Turner A.K., Johnson T.J., Thomson N.R., Smith S.G., Henderson I.R.
J. Bacteriol. 192:5822-5831(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: H10407 / ETEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FN649414 Genomic DNA. Translation: CBI99932.1.
RefSeqYP_006114016.1. NC_017633.1.

3D structure databases

ProteinModelPortalE3PFJ1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBI99932; CBI99932; ETEC_0427.
GeneID12881022.
KEGGelh:ETEC_0427.
PATRIC42956184. VBIEscCol136115_0494.

Organism-specific databases

CMRSearch...

Enzyme and pathway databases

BioCycECOL316401:GLD0-439-MONOMER.

Family and domain databases

Gene3D2.40.128.130. 1 hit.
InterProIPR005546. Auto_transptbeta.
IPR006315. OM_autotransptr_brl.
IPR011050. Pectin_lyase_fold/virulence.
IPR004899. Pertactin_central.
IPR003991. Pertactin_virulence_factor.
[Graphical view]
PfamPF03797. Autotransporter. 1 hit.
PF03212. Pertactin. 1 hit.
[Graphical view]
PRINTSPR01484. PRTACTNFAMLY.
SMARTSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMSSF103515. SSF103515. 1 hit.
SSF51126. SSF51126. 1 hit.
TIGRFAMsTIGR01414. autotrans_barl. 1 hit.
PROSITEPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3PFJ1_ECOH1
AccessionPrimary (citable) accession number: E3PFJ1
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)