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Protein
Submitted name:

Putative uncharacterized protein

Gene

CRE_05000

Organism
Caenorhabditis remanei (Caenorhabditis vulgaris)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:CRE_05000Imported
OrganismiCaenorhabditis remanei (Caenorhabditis vulgaris)Imported
Taxonomic identifieri31234 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008281 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei42 – 6221HelicalSequence analysisAdd
BLAST
Transmembranei88 – 11124HelicalSequence analysisAdd
BLAST
Transmembranei123 – 14220HelicalSequence analysisAdd
BLAST
Transmembranei154 – 17421HelicalSequence analysisAdd
BLAST
Transmembranei194 – 21724HelicalSequence analysisAdd
BLAST
Transmembranei229 – 25123HelicalSequence analysisAdd
BLAST
Transmembranei315 – 33319HelicalSequence analysisAdd
BLAST
Transmembranei376 – 39621HelicalSequence analysisAdd
BLAST
Transmembranei416 – 43621HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 441419Sequence analysisPRO_5003175279Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi31234.CRE05000.

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
InParanoidiE3MNE0.
OMAiYLASIAM.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PfamiPF03348. Serinc. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3MNE0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGALLAAPFC AASAACCFGS AACSLCCSAC PGAKNSTTTR IMYALMLISA
60 70 80 90 100
TFIAIMMLLP GVQQKLVDNK WLCDYAGVNC QHAIGYQAVY RVCAGAASFF
110 120 130 140 150
FLMMLLMFGV SSSQDGRSSI QNGFWFFKYL LMFGIIAGYF FIGSESLATP
160 170 180 190 200
LMYIGMLGAF LFILIQLILI VDFAHGLAES WVAQYEDNDS RACYVGLLVT
210 220 230 240 250
TFGGFLLCLV AAGYVFVNYA IGDGCGLPKF FVILNVLICI AISLLSVSPM
260 270 280 290 300
VQEVMPRSGL LQPVVISGYI IYLTWSALLS NPNESCNPTV ANITQSSIST
310 320 330 340 350
GTANKDDSFV TPMPVHSLIS LLIWLVCLVY ASIRNSSNTS LGKITGGNEE
360 370 380 390 400
NVQLNDVEGG KAWDNEEEGV AYSYSFFHFM FCLASLYVMM TLTSWYHPDS
410 420 430 440
DLAHLNSNMA SVWIKIFSSW ICAGLYSWTL VAPIIFPDRE F
Length:441
Mass (Da):48,071
Last modified:January 11, 2011 - v1
Checksum:iEE0E5CEEA4B6BD00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS268459 Genomic DNA. Translation: EFP05978.1.
RefSeqiXP_003102359.1. XM_003102311.1.

Genome annotation databases

EnsemblMetazoaiCRE05000; CRE05000; CRE05000.
GeneIDi9819309.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS268459 Genomic DNA. Translation: EFP05978.1.
RefSeqiXP_003102359.1. XM_003102311.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi31234.CRE05000.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCRE05000; CRE05000; CRE05000.
GeneIDi9819309.

Organism-specific databases

CTDi9819309.

Phylogenomic databases

eggNOGiKOG2592. Eukaryota.
ENOG410XP7K. LUCA.
InParanoidiE3MNE0.
OMAiYLASIAM.

Family and domain databases

InterProiIPR005016. TDE1/TMS.
[Graphical view]
PfamiPF03348. Serinc. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "PCAP assembly of the Caenorhabditis remanei genome."
    Caenorhabditis remanei Sequencing Consortium
    Wilson R.K.
    Submitted (JUL-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PB4641Imported.

Entry informationi

Entry nameiE3MNE0_CAERE
AccessioniPrimary (citable) accession number: E3MNE0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: March 16, 2016
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.