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Protein
Submitted name:

Uncharacterized protein

Gene

CRE_26445

Organism
Caenorhabditis remanei (Caenorhabditis vulgaris)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:CRE_26445Imported
OrganismiCaenorhabditis remanei (Caenorhabditis vulgaris)Imported
Taxonomic identifieri31234 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008281 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei21 – 43HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi31234.CRE26445.

Structurei

3D structure databases

ProteinModelPortaliE3LQK1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini309 – 395RRMInterPro annotationAdd BLAST87
Domaini506 – 535RanBP2-typeInterPro annotationAdd BLAST30

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG1995. Eukaryota.
ENOG4111QXA. LUCA.
InParanoidiE3LQK1.
OMAiPEGQAYW.
OrthoDBiEOG091G0U8W.

Family and domain databases

Gene3Di3.30.70.330. 1 hit.
InterProiView protein in InterPro
IPR012677. Nucleotide-bd_a/b_plait_sf.
IPR035979. RBD_domain_sf.
IPR000504. RRM_dom.
IPR034870. TET_fam.
IPR001876. Znf_RanBP2.
IPR036443. Znf_RanBP2_sf.
PANTHERiPTHR23238. PTHR23238. 2 hits.
PfamiView protein in Pfam
PF00076. RRM_1. 1 hit.
PF00641. zf-RanBP. 1 hit.
SMARTiView protein in SMART
SM00360. RRM. 1 hit.
SM00547. ZnF_RBZ. 1 hit.
SUPFAMiSSF54928. SSF54928. 1 hit.
SSF90209. SSF90209. 1 hit.
PROSITEiView protein in PROSITE
PS50102. RRM. 1 hit.
PS01358. ZF_RANBP2_1. 1 hit.
PS50199. ZF_RANBP2_2. 1 hit.

Sequencei

Sequence statusi: Complete.

E3LQK1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVRPTERSR NARPRRKRAD VFRYVRLATF FIYVFCSQFS FIIDLLSISD
60 70 80 90 100
DVPNRTENLD LKTTTIMASY DQSQPDYSTP EGQQAYWAYY QQQQQQQGAQ
110 120 130 140 150
PEQYGSYNNP GAQAVAAGAH AHDPYSKSQQ DPYASAAAYG GHEQAPQQQP
160 170 180 190 200
QNPYAPPPPG NDPYGQGAGG PPAGSDPYGQ SRGGSRGGFR GGYESGRGGA
210 220 230 240 250
GRGFDGGRSG FESGRGGYGG ERSGRGGFGG SSGGGRGGFD GERRGGSRWD
260 270 280 290 300
DGNSDRQGGP PGGRGGYQDR GPRRDGPGGG GGGYGGGGAG GAGAGSREFG
310 320 330 340 350
SDGRVELKET VFVQGISTTA NEAYIADVFS TCGDIAKNER GPRIKIYTDR
360 370 380 390 400
NTGEPKGECM ITFIDAAAAQ QAITMYNGQP FPGGSSPMNI SLAKFRADGG
410 420 430 440 450
DRGGRGGGRG GFGGGGRGGP MGGRGGFGGD RGGYGGGGRG GYDGGRGGGG
460 470 480 490 500
GFRGGDRGGD RGGFRGGDRG GFRGGDRGDR GGFRGGDRGG FRGGRGGGGN
510 520 530 540 550
ANMEQRKNDW PCDQCGNSNF AFRRECNQCQ APRPDGAGGG ERRGGGGPPG

GDRYRPY
Length:557
Mass (Da):57,437
Last modified:January 11, 2011 - v1
Checksum:iF524DE20A46B7284
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS268413 Genomic DNA. Translation: EFP07331.1.
RefSeqiXP_003113419.1. XM_003113371.1.

Genome annotation databases

EnsemblMetazoaiCRE26445; CRE26445; WBGene00054275.
GeneIDi9815535.

Similar proteinsi

Entry informationi

Entry nameiE3LQK1_CAERE
AccessioniPrimary (citable) accession number: E3LQK1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: February 28, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported