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Protein

DNA ligase

Gene

PGTG_12168

Organism
Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PGTG_12168Imported
OrganismiPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)Imported
Taxonomic identifieri418459 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaPucciniomycotinaPucciniomycetesPuccinialesPucciniaceaePuccinia
Proteomesi
  • UP000008783 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:PGTG_12168

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi5297.EFP86212

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini507 – 644DNA_LIGASE_A3InterPro annotationAdd BLAST138

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

InParanoidiE3KPH7
KOiK10747
OrthoDBiEOG092C0FHN

Family and domain databases

Gene3Di1.10.3260.10, 2 hits
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 2 hits
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS00333 DNA_LIGASE_A2, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

E3KPH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGAPASSSSN SNGPTKQATL NKFFSKPAGH KPALVQATVN SLFNKQNRKK
60 70 80 90 100
SEEKEEDTGQ GHVSRDLKRA PSIDVEEHEN PARSSKRAKS NQTKKAEEND
110 120 130 140 150
DDKDAIKATE EPREEPKPTK KISKKQSKTK VEEAEELNEL KVSNEPIQKK
160 170 180 190 200
ETPVIQQEEH TDEDEEAEEL AILDCGDDMN QQEGGVSWEK GKPIPYSSLA
210 220 230 240 250
YTFNLIDGTT KRLEITKYLT QYLIQVISRT PDELLKVIYL CINRLCPDYE
260 270 280 290 300
GIELGIGESL LIKAIGSFHG VAQIVDHSKD YSQAKKVGII TKLLASCQGE
310 320 330 340 350
EAKFIIRSLE GKLRIGLAER TVLVALANAA VRTGVGNKSN SKRKSSSEDL
360 370 380 390 400
AKDILEGTEI VKAVFSEIPS YDLVIPALLQ GGIKGLRENC KLTPGVPLKP
410 420 430 440 450
MLAKPTKAIS EVLDRFEGHK FTCEYKYDGE RAQIHFLSDG SISIFSRNSE
460 470 480 490 500
NMSVKYPDMV DQLPRAIKKD VTRNFVLDAE AVAWDRSTKK ILPFQELSKR
510 520 530 540 550
KRKDVKAEEI TIQVHIFAFD LLYLNDQPLI NTDFSHRRSL LKEHFNQIEG
560 570 580 590 600
EFSFATAVDV DNVEEIQTFL EQSVKAGCEG LMVKMLDGQS AHYEPSRRSM
610 620 630 640 650
NWLKVKKDYL AGIGDSLDLV VVGAYHGKGK RTAVYGAFLL ACYDPETESY
660 670 680 690 700
QTICKLGTGF SEEVLDCLHT KLHPLELTVK KNYYDVGESK PDVWFEPKLV
710 720 730 740 750
WEVLAADLSL SPVYSAAKGL CGDGTRGVSL RFPRYIKERD DKNGEDATSS
760 770 780
EQVAEMYKKQ ASTVDQAGAR NKKKKGKAGQ DDIEDDFW
Length:788
Mass (Da):88,019
Last modified:April 18, 2012 - v2
Checksum:i7B4FD3072CBC5654
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DS178299 Genomic DNA Translation: EFP86212.2
RefSeqiXP_003330631.2, XM_003330583.2

Genome annotation databases

EnsemblFungiiEFP86212; EFP86212; PGTG_12168
GeneIDi10540222
KEGGipgr:PGTG_12168

Similar proteinsi

Entry informationi

Entry nameiE3KPH7_PUCGT
AccessioniPrimary (citable) accession number: E3KPH7
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: April 18, 2012
Last modified: May 23, 2018
This is version 40 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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