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E3KPH7 (E3KPH7_PUCGT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length788 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
E3KPH7 [UniParc].

Last modified April 18, 2012. Version 2.
Checksum: 7B4FD3072CBC5654

FASTA78888,019
        10         20         30         40         50         60 
MGAPASSSSN SNGPTKQATL NKFFSKPAGH KPALVQATVN SLFNKQNRKK SEEKEEDTGQ 

        70         80         90        100        110        120 
GHVSRDLKRA PSIDVEEHEN PARSSKRAKS NQTKKAEEND DDKDAIKATE EPREEPKPTK 

       130        140        150        160        170        180 
KISKKQSKTK VEEAEELNEL KVSNEPIQKK ETPVIQQEEH TDEDEEAEEL AILDCGDDMN 

       190        200        210        220        230        240 
QQEGGVSWEK GKPIPYSSLA YTFNLIDGTT KRLEITKYLT QYLIQVISRT PDELLKVIYL 

       250        260        270        280        290        300 
CINRLCPDYE GIELGIGESL LIKAIGSFHG VAQIVDHSKD YSQAKKVGII TKLLASCQGE 

       310        320        330        340        350        360 
EAKFIIRSLE GKLRIGLAER TVLVALANAA VRTGVGNKSN SKRKSSSEDL AKDILEGTEI 

       370        380        390        400        410        420 
VKAVFSEIPS YDLVIPALLQ GGIKGLRENC KLTPGVPLKP MLAKPTKAIS EVLDRFEGHK 

       430        440        450        460        470        480 
FTCEYKYDGE RAQIHFLSDG SISIFSRNSE NMSVKYPDMV DQLPRAIKKD VTRNFVLDAE 

       490        500        510        520        530        540 
AVAWDRSTKK ILPFQELSKR KRKDVKAEEI TIQVHIFAFD LLYLNDQPLI NTDFSHRRSL 

       550        560        570        580        590        600 
LKEHFNQIEG EFSFATAVDV DNVEEIQTFL EQSVKAGCEG LMVKMLDGQS AHYEPSRRSM 

       610        620        630        640        650        660 
NWLKVKKDYL AGIGDSLDLV VVGAYHGKGK RTAVYGAFLL ACYDPETESY QTICKLGTGF 

       670        680        690        700        710        720 
SEEVLDCLHT KLHPLELTVK KNYYDVGESK PDVWFEPKLV WEVLAADLSL SPVYSAAKGL 

       730        740        750        760        770        780 
CGDGTRGVSL RFPRYIKERD DKNGEDATSS EQVAEMYKKQ ASTVDQAGAR NKKKKGKAGQ 


DDIEDDFW 

« Hide

References

« Hide 'large scale' references
[1]"The Genome Sequence of Puccinia graminis f. sp. tritici Strain CRL 75-36-700-3."
The Broad Institute Genome Sequencing Platform
Birren B., Lander E., Galagan J., Nusbaum C., Devon K., Cuomo C., Jaffe D., Butler J., Alvarez P., Gnerre S., Grabherr M., Mauceli E., Brockman W., Young S., LaButti K., Sykes S., DeCaprio D., Crawford M. expand/collapse author list , Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Larson L., White J., Zeng Q., Kodira C., Yandava C., Alvarado L., O'Leary S., Szabo L., Dean R., Schein J.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CRL 75-36-700-3.
[2]"Obligate biotrophy features unraveled by the genomic analysis of rust fungi."
Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E., Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L., Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E., Goldberg J., Grabherr M.G. expand/collapse author list , Kodira C.D., Kohler A., Kuees U., Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C., Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N., Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H., Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P., Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C., Grigoriev I.V., Szabo L.J., Martin F.
Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CRL 75-36-700-3 / race SCCL.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS178299 Genomic DNA. Translation: EFP86212.2.
RefSeqXP_003330631.2. XM_003330583.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiEFP86212; EFP86212; PGTG_12168.
GeneID10540222.
KEGGpgr:PGTG_12168.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3KPH7_PUCGT
AccessionPrimary (citable) accession number: E3KPH7
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: April 18, 2012
Last modified: November 13, 2013
This is version 19 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)