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E3KPH7

- E3KPH7_PUCGT

UniProt

E3KPH7 - E3KPH7_PUCGT

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Protein
DNA ligase
Gene
PGTG_12168
Organism
Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PGTG_12168Imported
OrganismiPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)Imported
Taxonomic identifieri418459 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaPucciniomycotinaPucciniomycetesPuccinialesPucciniaceaePuccinia
ProteomesiUP000008783: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3KPH7-1 [UniParc]FASTAAdd to Basket

« Hide

MGAPASSSSN SNGPTKQATL NKFFSKPAGH KPALVQATVN SLFNKQNRKK    50
SEEKEEDTGQ GHVSRDLKRA PSIDVEEHEN PARSSKRAKS NQTKKAEEND 100
DDKDAIKATE EPREEPKPTK KISKKQSKTK VEEAEELNEL KVSNEPIQKK 150
ETPVIQQEEH TDEDEEAEEL AILDCGDDMN QQEGGVSWEK GKPIPYSSLA 200
YTFNLIDGTT KRLEITKYLT QYLIQVISRT PDELLKVIYL CINRLCPDYE 250
GIELGIGESL LIKAIGSFHG VAQIVDHSKD YSQAKKVGII TKLLASCQGE 300
EAKFIIRSLE GKLRIGLAER TVLVALANAA VRTGVGNKSN SKRKSSSEDL 350
AKDILEGTEI VKAVFSEIPS YDLVIPALLQ GGIKGLRENC KLTPGVPLKP 400
MLAKPTKAIS EVLDRFEGHK FTCEYKYDGE RAQIHFLSDG SISIFSRNSE 450
NMSVKYPDMV DQLPRAIKKD VTRNFVLDAE AVAWDRSTKK ILPFQELSKR 500
KRKDVKAEEI TIQVHIFAFD LLYLNDQPLI NTDFSHRRSL LKEHFNQIEG 550
EFSFATAVDV DNVEEIQTFL EQSVKAGCEG LMVKMLDGQS AHYEPSRRSM 600
NWLKVKKDYL AGIGDSLDLV VVGAYHGKGK RTAVYGAFLL ACYDPETESY 650
QTICKLGTGF SEEVLDCLHT KLHPLELTVK KNYYDVGESK PDVWFEPKLV 700
WEVLAADLSL SPVYSAAKGL CGDGTRGVSL RFPRYIKERD DKNGEDATSS 750
EQVAEMYKKQ ASTVDQAGAR NKKKKGKAGQ DDIEDDFW 788
Length:788
Mass (Da):88,019
Last modified:April 18, 2012 - v2
Checksum:i7B4FD3072CBC5654
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS178299 Genomic DNA. Translation: EFP86212.2.
RefSeqiXP_003330631.2. XM_003330583.2.

Genome annotation databases

EnsemblFungiiEFP86212; EFP86212; PGTG_12168.
GeneIDi10540222.
KEGGipgr:PGTG_12168.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS178299 Genomic DNA. Translation: EFP86212.2 .
RefSeqi XP_003330631.2. XM_003330583.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFP86212 ; EFP86212 ; PGTG_12168 .
GeneIDi 10540222.
KEGGi pgr:PGTG_12168.

Phylogenomic databases

KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CRL 75-36-700-3.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CRL 75-36-700-3 / race SCCL.

Entry informationi

Entry nameiE3KPH7_PUCGT
AccessioniPrimary (citable) accession number: E3KPH7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: April 18, 2012
Last modified: November 13, 2013
This is version 19 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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