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E3KPH7

- E3KPH7_PUCGT

UniProt

E3KPH7 - E3KPH7_PUCGT

Protein

DNA ligase

Gene

PGTG_12168

Organism
Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 2 (18 Apr 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    ORF Names:PGTG_12168Imported
    OrganismiPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)Imported
    Taxonomic identifieri418459 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaPucciniomycotinaPucciniomycetesPuccinialesPucciniaceaePuccinia
    ProteomesiUP000008783: Unassembled WGS sequence

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10747.
    OrthoDBiEOG7TXKRG.

    Family and domain databases

    Gene3Di1.10.3260.10. 2 hits.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 2 hits.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3KPH7-1 [UniParc]FASTAAdd to Basket

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    MGAPASSSSN SNGPTKQATL NKFFSKPAGH KPALVQATVN SLFNKQNRKK    50
    SEEKEEDTGQ GHVSRDLKRA PSIDVEEHEN PARSSKRAKS NQTKKAEEND 100
    DDKDAIKATE EPREEPKPTK KISKKQSKTK VEEAEELNEL KVSNEPIQKK 150
    ETPVIQQEEH TDEDEEAEEL AILDCGDDMN QQEGGVSWEK GKPIPYSSLA 200
    YTFNLIDGTT KRLEITKYLT QYLIQVISRT PDELLKVIYL CINRLCPDYE 250
    GIELGIGESL LIKAIGSFHG VAQIVDHSKD YSQAKKVGII TKLLASCQGE 300
    EAKFIIRSLE GKLRIGLAER TVLVALANAA VRTGVGNKSN SKRKSSSEDL 350
    AKDILEGTEI VKAVFSEIPS YDLVIPALLQ GGIKGLRENC KLTPGVPLKP 400
    MLAKPTKAIS EVLDRFEGHK FTCEYKYDGE RAQIHFLSDG SISIFSRNSE 450
    NMSVKYPDMV DQLPRAIKKD VTRNFVLDAE AVAWDRSTKK ILPFQELSKR 500
    KRKDVKAEEI TIQVHIFAFD LLYLNDQPLI NTDFSHRRSL LKEHFNQIEG 550
    EFSFATAVDV DNVEEIQTFL EQSVKAGCEG LMVKMLDGQS AHYEPSRRSM 600
    NWLKVKKDYL AGIGDSLDLV VVGAYHGKGK RTAVYGAFLL ACYDPETESY 650
    QTICKLGTGF SEEVLDCLHT KLHPLELTVK KNYYDVGESK PDVWFEPKLV 700
    WEVLAADLSL SPVYSAAKGL CGDGTRGVSL RFPRYIKERD DKNGEDATSS 750
    EQVAEMYKKQ ASTVDQAGAR NKKKKGKAGQ DDIEDDFW 788
    Length:788
    Mass (Da):88,019
    Last modified:April 18, 2012 - v2
    Checksum:i7B4FD3072CBC5654
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS178299 Genomic DNA. Translation: EFP86212.2.
    RefSeqiXP_003330631.2. XM_003330583.2.

    Genome annotation databases

    EnsemblFungiiEFP86212; EFP86212; PGTG_12168.
    GeneIDi10540222.
    KEGGipgr:PGTG_12168.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    DS178299 Genomic DNA. Translation: EFP86212.2 .
    RefSeqi XP_003330631.2. XM_003330583.2.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii EFP86212 ; EFP86212 ; PGTG_12168 .
    GeneIDi 10540222.
    KEGGi pgr:PGTG_12168.

    Phylogenomic databases

    KOi K10747.
    OrthoDBi EOG7TXKRG.

    Family and domain databases

    Gene3Di 1.10.3260.10. 2 hits.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 2 hits.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: CRL 75-36-700-3.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CRL 75-36-700-3 / race SCCLImported.

    Entry informationi

    Entry nameiE3KPH7_PUCGT
    AccessioniPrimary (citable) accession number: E3KPH7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: April 18, 2012
    Last modified: October 1, 2014
    This is version 20 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3