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E3KPH7

- E3KPH7_PUCGT

UniProt

E3KPH7 - E3KPH7_PUCGT

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Protein

DNA ligase

Gene

PGTG_12168

Organism
Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:PGTG_12168Imported
OrganismiPuccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus)Imported
Taxonomic identifieri418459 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaPucciniomycotinaPucciniomycetesPuccinialesPucciniaceaePuccinia
ProteomesiUP000008783: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

InParanoidiE3KPH7.
KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3KPH7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGAPASSSSN SNGPTKQATL NKFFSKPAGH KPALVQATVN SLFNKQNRKK
60 70 80 90 100
SEEKEEDTGQ GHVSRDLKRA PSIDVEEHEN PARSSKRAKS NQTKKAEEND
110 120 130 140 150
DDKDAIKATE EPREEPKPTK KISKKQSKTK VEEAEELNEL KVSNEPIQKK
160 170 180 190 200
ETPVIQQEEH TDEDEEAEEL AILDCGDDMN QQEGGVSWEK GKPIPYSSLA
210 220 230 240 250
YTFNLIDGTT KRLEITKYLT QYLIQVISRT PDELLKVIYL CINRLCPDYE
260 270 280 290 300
GIELGIGESL LIKAIGSFHG VAQIVDHSKD YSQAKKVGII TKLLASCQGE
310 320 330 340 350
EAKFIIRSLE GKLRIGLAER TVLVALANAA VRTGVGNKSN SKRKSSSEDL
360 370 380 390 400
AKDILEGTEI VKAVFSEIPS YDLVIPALLQ GGIKGLRENC KLTPGVPLKP
410 420 430 440 450
MLAKPTKAIS EVLDRFEGHK FTCEYKYDGE RAQIHFLSDG SISIFSRNSE
460 470 480 490 500
NMSVKYPDMV DQLPRAIKKD VTRNFVLDAE AVAWDRSTKK ILPFQELSKR
510 520 530 540 550
KRKDVKAEEI TIQVHIFAFD LLYLNDQPLI NTDFSHRRSL LKEHFNQIEG
560 570 580 590 600
EFSFATAVDV DNVEEIQTFL EQSVKAGCEG LMVKMLDGQS AHYEPSRRSM
610 620 630 640 650
NWLKVKKDYL AGIGDSLDLV VVGAYHGKGK RTAVYGAFLL ACYDPETESY
660 670 680 690 700
QTICKLGTGF SEEVLDCLHT KLHPLELTVK KNYYDVGESK PDVWFEPKLV
710 720 730 740 750
WEVLAADLSL SPVYSAAKGL CGDGTRGVSL RFPRYIKERD DKNGEDATSS
760 770 780
EQVAEMYKKQ ASTVDQAGAR NKKKKGKAGQ DDIEDDFW
Length:788
Mass (Da):88,019
Last modified:April 18, 2012 - v2
Checksum:i7B4FD3072CBC5654
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS178299 Genomic DNA. Translation: EFP86212.2.
RefSeqiXP_003330631.2. XM_003330583.2.

Genome annotation databases

EnsemblFungiiEFP86212; EFP86212; PGTG_12168.
GeneIDi10540222.
KEGGipgr:PGTG_12168.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DS178299 Genomic DNA. Translation: EFP86212.2 .
RefSeqi XP_003330631.2. XM_003330583.2.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii EFP86212 ; EFP86212 ; PGTG_12168 .
GeneIDi 10540222.
KEGGi pgr:PGTG_12168.

Phylogenomic databases

InParanoidi E3KPH7.
KOi K10747.
OrthoDBi EOG7TXKRG.

Family and domain databases

Gene3Di 1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 2 hits.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CRL 75-36-700-3.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CRL 75-36-700-3 / race SCCLImported.

Entry informationi

Entry nameiE3KPH7_PUCGT
AccessioniPrimary (citable) accession number: E3KPH7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: April 18, 2012
Last modified: October 29, 2014
This is version 21 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3