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E3KD60 (E3KD60_PUCGT) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length535 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
E3KD60 [UniParc].

Last modified April 18, 2012. Version 2.
Checksum: AAE534F9341E5EDF

FASTA53560,423
        10         20         30         40         50         60 
MSLSKHVKPE QLLQSVKEHG HKTVHGDHHE NISTPYSSRY ASREIPKFKL PSKGIEPDTA 

        70         80         90        100        110        120 
YQLIHDILDL DGRENANLAS FVHTWAPKQA IQLCVENLGK NLIDQDEYPQ TQILHTRCIS 

       130        140        150        160        170        180 
MLAHLWHAHN SSNAIGTATT GSSEAIQLGG LAMKKIWQAK RKAAGKSIHE PGPNIVMGAN 

       190        200        210        220        230        240 
AQVALEKFAR YFDVEMRLVP VSEKTNYCLD PIKAMEYVDE NTIGVFVILG STYTGHFEPV 

       250        260        270        280        290        300 
KPLSDLLDAY EAKTGISVPI HVDGASGAFI APFVYPDLPW DFRLPRVVSI NTSGHKFGLT 

       310        320        330        340        350        360 
YVGCGWVVWR DQAHLPKELI FELHYLGSVE YSFSLNFSRP AHPIIHQYYN FVQLGFEGYR 

       370        380        390        400        410        420 
AIGLDDLANA RLLSRALERS RYYKVLSDIH RKKADMQKPR DQVFGESGLK FEEYVMGLPV 

       430        440        450        460        470        480 
VAFCWTDEFK KKHPHLKQSW VQTLLRAHAW IVPNYELPPD LEDLQILRVV VRESMSPELV 

       490        500        510        520        530 
DRLFCSIIEI TECLIKEGGP GNFLDAVPKG KSHEHAFGNH QREDATKPVG YARPC 

« Hide

References

« Hide 'large scale' references
[1]"The Genome Sequence of Puccinia graminis f. sp. tritici Strain CRL 75-36-700-3."
The Broad Institute Genome Sequencing Platform
Birren B., Lander E., Galagan J., Nusbaum C., Devon K., Cuomo C., Jaffe D., Butler J., Alvarez P., Gnerre S., Grabherr M., Mauceli E., Brockman W., Young S., LaButti K., Sykes S., DeCaprio D., Crawford M. expand/collapse author list , Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Larson L., White J., Zeng Q., Kodira C., Yandava C., Alvarado L., O'Leary S., Szabo L., Dean R., Schein J.
Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CRL 75-36-700-3.
[2]"Obligate biotrophy features unraveled by the genomic analysis of rust fungi."
Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E., Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L., Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E., Goldberg J., Grabherr M.G. expand/collapse author list , Kodira C.D., Kohler A., Kuees U., Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C., Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N., Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H., Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P., Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C., Grigoriev I.V., Szabo L.J., Martin F.
Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CRL 75-36-700-3 / race SCCL.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
DS178281 Genomic DNA. Translation: EFP82298.2.
RefSeqXP_003326717.2. XM_003326669.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiEFP82298; EFP82298; PGTG_07695.
GeneID10529671.
KEGGpgr:PGTG_07695.

Phylogenomic databases

KOK01580.
OrthoDBEOG7P2Z22.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3KD60_PUCGT
AccessionPrimary (citable) accession number: E3KD60
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: April 18, 2012
Last modified: November 13, 2013
This is version 18 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)