E3KD60 (E3KD60_PUCGT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL EFP82298.2

Gene names

ORF Names:

PGTG_07695 EMBL EFP82298.2

Organism

Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) (Black stem rust fungus) [Reference proteome] EMBL EFP82298.2

Taxonomic identifier

418459 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Pucciniomycotina › Pucciniomycetes › Pucciniales › Pucciniaceae › Puccinia › Puccinia graminis › Puccinia graminis f. sp. tritici

Protein attributes

Sequence length	535 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cellular response to oxidative stress Inferred from electronic annotation. Source: EnsemblFungi glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: EnsemblFungi
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3KD60 [UniParc]. Last modified April 18, 2012. Version 2. Checksum: AAE534F9341E5EDF	FASTA	535	60,423
	10 20 30 40 50 60 MSLSKHVKPE QLLQSVKEHG HKTVHGDHHE NISTPYSSRY ASREIPKFKL PSKGIEPDTA 70 80 90 100 110 120 YQLIHDILDL DGRENANLAS FVHTWAPKQA IQLCVENLGK NLIDQDEYPQ TQILHTRCIS 130 140 150 160 170 180 MLAHLWHAHN SSNAIGTATT GSSEAIQLGG LAMKKIWQAK RKAAGKSIHE PGPNIVMGAN 190 200 210 220 230 240 AQVALEKFAR YFDVEMRLVP VSEKTNYCLD PIKAMEYVDE NTIGVFVILG STYTGHFEPV 250 260 270 280 290 300 KPLSDLLDAY EAKTGISVPI HVDGASGAFI APFVYPDLPW DFRLPRVVSI NTSGHKFGLT 310 320 330 340 350 360 YVGCGWVVWR DQAHLPKELI FELHYLGSVE YSFSLNFSRP AHPIIHQYYN FVQLGFEGYR 370 380 390 400 410 420 AIGLDDLANA RLLSRALERS RYYKVLSDIH RKKADMQKPR DQVFGESGLK FEEYVMGLPV 430 440 450 460 470 480 VAFCWTDEFK KKHPHLKQSW VQTLLRAHAW IVPNYELPPD LEDLQILRVV VRESMSPELV 490 500 510 520 530 DRLFCSIIEI TECLIKEGGP GNFLDAVPKG KSHEHAFGNH QREDATKPVG YARPC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"The Genome Sequence of Puccinia graminis f. sp. tritici Strain CRL 75-36-700-3." The Broad Institute Genome Sequencing Platform Birren B., Lander E., Galagan J., Nusbaum C., Devon K., Cuomo C., Jaffe D., Butler J., Alvarez P., Gnerre S., Grabherr M., Mauceli E., Brockman W., Young S., LaButti K., Sykes S., DeCaprio D., Crawford M. , Koehrsen M., Engels R., Montgomery P., Pearson M., Howarth C., Larson L., White J., Zeng Q., Kodira C., Yandava C., Alvarado L., O'Leary S., Szabo L., Dean R., Schein J. Submitted (JAN-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: CRL 75-36-700-3.
[2]	"Obligate biotrophy features unraveled by the genomic analysis of rust fungi." Duplessis S., Cuomo C.A., Lin Y.-C., Aerts A., Tisserant E., Veneault-Fourrey C., Joly D.L., Hacquard S., Amselem J., Cantarel B.L., Chiu R., Coutinho P.M., Feau N., Field M., Frey P., Gelhaye E., Goldberg J., Grabherr M.G. , Kodira C.D., Kohler A., Kuees U., Lindquist E.A., Lucas S.M., Mago R., Mauceli E., Morin E., Murat C., Pangilinan J.L., Park R., Pearson M., Quesneville H., Rouhier N., Sakthikumar S., Salamov A.A., Schmutz J., Selles B., Shapiro H., Tanguay P., Tuskan G.A., Henrissat B., Van de Peer Y., Rouze P., Ellis J.G., Dodds P.N., Schein J.E., Zhong S., Hamelin R.C., Grigoriev I.V., Szabo L.J., Martin F. Proc. Natl. Acad. Sci. U.S.A. 108:9166-9171(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CRL 75-36-700-3 / race SCCL.

Cross-references

Sequence databases
EMBL GenBank DDBJ	DS178281 Genomic DNA. Translation: EFP82298.2.
RefSeq	XP_003326717.2. XM_003326669.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	10529671.
KEGG	pgr:PGTG_07695.
Phylogenomic databases
KO	K01580.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR021115. Pyridoxal-P_BS. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
PROSITE	PS00392. DDC_GAD_HDC_YDC. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E3KD60_PUCGT

Accession

Primary (citable) accession number: E3KD60

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	April 18, 2012
Last modified:	March 6, 2013
This is version 15 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)