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E3JC30 (E3JC30_FRASU) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:FraEuI1c_5500 EMBL ADP83486.1
OrganismFrankia sp. (strain EuI1c) [Complete proteome] [HAMAP] EMBL ADP83486.1
Taxonomic identifier298654 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length502 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Sequences

Sequence LengthMass (Da)Tools
E3JC30 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 687F53E51A9A1DB5

FASTA50253,441
        10         20         30         40         50         60 
MTPALTARPR PTPDFLKTGP KKLLIGGEWV DAAGGRTFTS VNPSTGATIA ELAEGDATDV 

        70         80         90        100        110        120 
DRAVAAARAA FDGGPWPRLT PRHRQDLLWA FADAVQREFE ELRLLETLDM GVPIGRPRAK 

       130        140        150        160        170        180 
ARTSWEASVL RYFAGWATKI QGETIQSSLP GSVFTYTQKE PVGVVAAIVP WNRPISNAIW 

       190        200        210        220        230        240 
KIAPVLATGC TMVLKPSEEA SLVAIRLGEL LVEIGLPAGV VNVVTGLGAT VGAALAEHPG 

       250        260        270        280        290        300 
VDKVAFTGST AVGQQIIRAS AGNVKRVTVE LGGKSPDVVF ADADLDRAVP GVAMGVFLNS 

       310        320        330        340        350        360 
GQICCAGSRV YVERPVYDEF VERMSTFADG LRVGDSLDPE TVIGPVVSAR QLDRVVGYLD 

       370        380        390        400        410        420 
LGKAEGVRTT AGGRRLADGD LGDGFFVAPT VFADVRDDMR VAREEIFGPV ACVLPFDTLE 

       430        440        450        460        470        480 
EATTRSNDSP FGLAGGVWTR DVGRAFRMAN GLRVGTVWVN TMLDMDPAVP FGGYKTSGYG 

       490        500 
REMGQSSLES YLNVKSVWIN TE 

« Hide

References

[1]"Complete sequence of Frankia sp. EuI1c."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. expand/collapse author list , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EuI1c EMBL ADP83486.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002299 Genomic DNA. Translation: ADP83486.1.
RefSeqYP_004019356.1. NC_014666.1.

3D structure databases

ProteinModelPortalE3JC30.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP83486; ADP83486; FraEuI1c_5500.
GeneID9975945.
KEGGfri:FraEuI1c_5500.
PATRIC42623273. VBIFraSp2231_5667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000271505.
KOK00128.
OMANELAMIV.

Enzyme and pathway databases

BioCycFSP298654:GHN6-5539-MONOMER.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3JC30_FRASU
AccessionPrimary (citable) accession number: E3JC30
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)