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E3J791 (E3J791_FRASU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:FraEuI1c_0278 EMBL ADP78364.1
OrganismFrankia sp. (strain EuI1c) [Complete proteome] [HAMAP] EMBL ADP78364.1
Taxonomic identifier298654 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length392 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
E3J791 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 2BB3BB06F661CFF8

FASTA39241,317
        10         20         30         40         50         60 
MAKQAYVRTK PHLNIGTMGH VDHGKTTLTA AITKVLADGG SGTFIPFDRI DRAPEEIARG 

        70         80         90        100        110        120 
ITINIAHVEY ETANRHYAHV DMPGHADYVK NMITGAAQLD GAILVVSAQD GIMPQTTEHV 

       130        140        150        160        170        180 
LLARHVGVRH VVVALNKADA ADPELTDLVE LEIRELLSAH GYPGEEIPVV RVSGLRALAG 

       190        200        210        220        230        240 
DPTWTASIAT LLDAVDSYVP VPDRYTGAPF LLPVENVLTI TGRGTVVTGA IERGTVRVGD 

       250        260        270        280        290        300 
RVEVRGLGTA LTTVVTGLET FGKPMDSGQA GDNVALLLRG VQRGQIRRGN VVAAPGSVTV 

       310        320        330        340        350        360 
HQRFAAQVHL LTAAEGGRRT AIASGYRPQF YLRTTDVAGE VDLGEAGLAL PGETAELTVE 

       370        380        390 
LSKPVPLETG LGFAIREGGR TVGAGTVVTV LD 

« Hide

References

[1]"Complete sequence of Frankia sp. EuI1c."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. expand/collapse author list , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EuI1c EMBL ADP78364.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002299 Genomic DNA. Translation: ADP78364.1.
RefSeqYP_004014234.1. NC_014666.1.

3D structure databases

ProteinModelPortalE3J791.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP78364; ADP78364; FraEuI1c_0278.
GeneID9970689.
KEGGfri:FraEuI1c_0278.
PATRIC42612456. VBIFraSp2231_0291.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000229290.
KOK02358.
OMAHLNIGTM.

Enzyme and pathway databases

BioCycFSP298654:GHN6-283-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3J791_FRASU
AccessionPrimary (citable) accession number: E3J791
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 11, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)