E3J4E6 (E3J4E6_FRASU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase EMBL ADP83065.1
EC=4.1.1.15 EMBL ADP83065.1

Gene names

Ordered Locus Names:

FraEuI1c_5076 EMBL ADP83065.1

Organism

Frankia sp. (strain EuI1c) [Complete proteome] [HAMAP]

Taxonomic identifier

298654 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	470 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382 EMBL ADP83065.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: EC pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3J4E6 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: 210F47F28CC8A1E8	FASTA	470	50,934
	10 20 30 40 50 60 MGDQANARLA VRPQFRWPAG QARPGEETGG ELPRYRIPAG PTDPETAYQL VHDELMLDGN 70 80 90 100 110 120 ARLNLATFVT TWMDPHADRL MAECAAKNMI DKDEYPQTAE LEARCVSMLA DLWHAADAAD 130 140 150 160 170 180 AVGCSTTGSS EAGMLAGLAM TRRWRAARRA AGLPADRPNL VMGANVQVCW EKFARYWDVE 190 200 210 220 230 240 ARLVPLAPGR THLTADEAVR HCDENTVGVV AILGSTFDGT YEPVAEIAAA LDRLAAGGGP 250 260 270 280 290 300 DVPVHVDAAS GGFVAPFCDP DLLWDFRLDR VVSINASGHK FGLVYPGVGW VLWRDREHLP 310 320 330 340 350 360 EELVFHVDYL GGTMPTFALN FSRPGAQVVA QYYSLLRHGR EGYRQVIQGC RDVATRLSGE 370 380 390 400 410 420 IAEMGPFALV SDGAGGGIPA FAFTLRDADA AGFSVFDVSE LLRTRGWQVP AYRFPPALQE 430 440 450 460 470 LAVLRVVVRN GFGPDLADLL VADLRRVVDR LTDAGRPGPP PAEATAAFHH

References

[1]

"Complete sequence of Frankia sp. EuI1c." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T. Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EuI1c EMBL ADP83065.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002299 Genomic DNA. Translation: ADP83065.1.
RefSeq	YP_004018935.1. NC_014666.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADP83065; ADP83065; FraEuI1c_5076.
GeneID	9975519.
KEGG	fri:FraEuI1c_5076.
PATRIC	42622385. VBIFraSp2231_5224.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
Enzyme and pathway databases
BioCyc	FSP298654:GHN6-5113-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E3J4E6_FRASU

Accession

Primary (citable) accession number: E3J4E6

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)