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E3J4E6 (E3J4E6_FRASU) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.15 EMBL ADP83065.1
Gene names
Ordered Locus Names:FraEuI1c_5076 EMBL ADP83065.1
OrganismFrankia sp. (strain EuI1c) [Complete proteome] [HAMAP] EMBL ADP83065.1
Taxonomic identifier298654 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length470 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
E3J4E6 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 210F47F28CC8A1E8

FASTA47050,934
        10         20         30         40         50         60 
MGDQANARLA VRPQFRWPAG QARPGEETGG ELPRYRIPAG PTDPETAYQL VHDELMLDGN 

        70         80         90        100        110        120 
ARLNLATFVT TWMDPHADRL MAECAAKNMI DKDEYPQTAE LEARCVSMLA DLWHAADAAD 

       130        140        150        160        170        180 
AVGCSTTGSS EAGMLAGLAM TRRWRAARRA AGLPADRPNL VMGANVQVCW EKFARYWDVE 

       190        200        210        220        230        240 
ARLVPLAPGR THLTADEAVR HCDENTVGVV AILGSTFDGT YEPVAEIAAA LDRLAAGGGP 

       250        260        270        280        290        300 
DVPVHVDAAS GGFVAPFCDP DLLWDFRLDR VVSINASGHK FGLVYPGVGW VLWRDREHLP 

       310        320        330        340        350        360 
EELVFHVDYL GGTMPTFALN FSRPGAQVVA QYYSLLRHGR EGYRQVIQGC RDVATRLSGE 

       370        380        390        400        410        420 
IAEMGPFALV SDGAGGGIPA FAFTLRDADA AGFSVFDVSE LLRTRGWQVP AYRFPPALQE 

       430        440        450        460        470 
LAVLRVVVRN GFGPDLADLL VADLRRVVDR LTDAGRPGPP PAEATAAFHH 

« Hide

References

[1]"Complete sequence of Frankia sp. EuI1c."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. expand/collapse author list , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EuI1c EMBL ADP83065.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002299 Genomic DNA. Translation: ADP83065.1.
RefSeqYP_004018935.1. NC_014666.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP83065; ADP83065; FraEuI1c_5076.
GeneID9975519.
KEGGfri:FraEuI1c_5076.
PATRIC42622385. VBIFraSp2231_5224.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAIADLWNA.

Enzyme and pathway databases

BioCycFSP298654:GHN6-5113-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3J4E6_FRASU
AccessionPrimary (citable) accession number: E3J4E6
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)