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E3IW58 (E3IW58_FRASU) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:FraEuI1c_0822 EMBL ADP78900.1
OrganismFrankia sp. (strain EuI1c) [Complete proteome] [HAMAP] EMBL ADP78900.1
Taxonomic identifier298654 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeFrankiaceaeFrankia

Protein attributes

Sequence length1245 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
E3IW58 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 69B48FA8346199B4

FASTA1,245135,737
        10         20         30         40         50         60 
MTAPTVPASG PDFGTNEWLV FEIYQQYLAD PESVSPEWRE FLSDYHPGAP TATDHTDPES 

        70         80         90        100        110        120 
ARAAVGTVSP TPAEAAASAP PVAAAAAPAP VTPAPVATPA PVAAAPAPPA AKPAAPAAPD 

       130        140        150        160        170        180 
AAAGTLTTTL RGASARVVTN METSLHVPTA TSVRAVPAKL MIDNRIVINR HLARSRGGKI 

       190        200        210        220        230        240 
SFTHLIGYAM VKALEAFPEM NNSFATVGGK PALVQPEHVN LGLAIDLVTG KGRQLVVAAV 

       250        260        270        280        290        300 
KAAETMDFAQ FWGTYEDIVR RARTGKLTAD DFSGVTISLT NPGGIGTVHS VPRLMEGQGT 

       310        320        330        340        350        360 
IIGVGAMEYP AEFAGASTET LARMAISKVT TLTSTYDHRI IQGAQSGEYL RRIHQLLLGE 

       370        380        390        400        410        420 
DEFYDEIFRS LRVPYEPVRW ITDIPTSHEG DLDHSARVQE LIHAFRVRGH LMADTNPLEF 

       430        440        450        460        470        480 
TIRSHPDLDI RSHGLTLWDL DREFPVAGFA AHRMMSLRDV MGVLRDSYCR RVGIEYMHIQ 

       490        500        510        520        530        540 
EPEERKWIQA RVERSAERPD PAEQLHVLER LGAAEAFESF LQTKYVGQRR FSLEGAESAI 

       550        560        570        580        590        600 
PLLDEVLSRA SGAGMDEVVI GMAHRGRLNV LANIVGKSYR QIFAEFEGHL DPQTAHGSGD 

       610        620        630        640        650        660 
VKYHLGAEGH YQCREGKQIP VSVVANPSHL EAVDPVLEGV VRAKQDILNK GIEGFTVLPV 

       670        680        690        700        710        720 
LVHGDAAFAG QGVVAETLNL SQLRGYRTGG TVHLVINNQV GFTTSPTESR SSVYATDVAR 

       730        740        750        760        770        780 
MVQAPIFHVN GDDPEACVRV AALAFDYREA FHKDVVIDMI CYRRRGHNEM DEPSFTQPLM 

       790        800        810        820        830        840 
YDEIAAKRSV RKLYTEALIG RGDITRDQAE EAMKTYRLEL EKAFAETRDT TGDKPTPQPR 

       850        860        870        880        890        900 
IVTTAEDAAA AAAVSTAVPL EVVKQVIDTQ VNLPADFTVH PRLRPQLERR AQMIENGSID 

       910        920        930        940        950        960 
WACAETIAFG SLLLDGRSVR LTGQDSRRGT FGQRHAVVVD RYTGEDYAPL RSLRRADGGQ 

       970        980        990       1000       1010       1020 
VGTFYAYDSL LSEYAAMGFE YGYSVARLDM LVLWEAQFGD FANGAQSIID EFLSAGEAKW 

      1030       1040       1050       1060       1070       1080 
GQRNALTLLL PHGYEGQGPD HSSARMERFL LLCADDNMTV SAPSSPASYF HLLRRHTLSP 

      1090       1100       1110       1120       1130       1140 
VRRPLVVFTP KSMLRLKAAA ASVQELTAGS WQPVIDDATI TDPSAVRRVL LSAGKVHWDL 

      1150       1160       1170       1180       1190       1200 
AEARAHRDDK GQFALLRVEQ LYPTPGAEVA EALRRYPNAT DVVWVQEEPA NQGAYPHVAL 

      1210       1220       1230       1240 
HLPEHLPAGL RLRRVSRKAS AAPASGSSKV HEKEQKALIE AAFAA 

« Hide

References

[1]"Complete sequence of Frankia sp. EuI1c."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. expand/collapse author list , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: EuI1c EMBL ADP78900.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002299 Genomic DNA. Translation: ADP78900.1.
RefSeqYP_004014770.1. NC_014666.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP78900; ADP78900; FraEuI1c_0822.
GeneID9971241.
KEGGfri:FraEuI1c_0822.
PATRIC42613604. VBIFraSp2231_0858.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000259587.
KOK00164.
OMAHILRRQL.

Enzyme and pathway databases

BioCycFSP298654:GHN6-835-MONOMER.

Family and domain databases

Gene3D3.30.559.10. 1 hit.
InterProIPR001078. 2-oxoacid_DH_actylTfrase.
IPR011603. 2oxoglutarate_DH_E1.
IPR023213. CAT-like_dom.
IPR001017. DH_E1.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERPTHR23152. PTHR23152. 1 hit.
PfamPF00198. 2-oxoacid_dh. 1 hit.
PF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTSM00861. Transket_pyr. 1 hit.
[Graphical view]
TIGRFAMsTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3IW58_FRASU
AccessionPrimary (citable) accession number: E3IW58
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)