E3IW58 (E3IW58_FRASU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase, E1 subunit EMBL ADP78900.1

Gene names

Ordered Locus Names:

FraEuI1c_0822 EMBL ADP78900.1

Organism

Frankia sp. (strain EuI1c) [Complete proteome] [HAMAP]

Taxonomic identifier

298654 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Frankiaceae › Frankia

Protein attributes

Sequence length	1245 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular_function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3IW58 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: 69B48FA8346199B4	FASTA	1,245	135,737
	10 20 30 40 50 60 MTAPTVPASG PDFGTNEWLV FEIYQQYLAD PESVSPEWRE FLSDYHPGAP TATDHTDPES 70 80 90 100 110 120 ARAAVGTVSP TPAEAAASAP PVAAAAAPAP VTPAPVATPA PVAAAPAPPA AKPAAPAAPD 130 140 150 160 170 180 AAAGTLTTTL RGASARVVTN METSLHVPTA TSVRAVPAKL MIDNRIVINR HLARSRGGKI 190 200 210 220 230 240 SFTHLIGYAM VKALEAFPEM NNSFATVGGK PALVQPEHVN LGLAIDLVTG KGRQLVVAAV 250 260 270 280 290 300 KAAETMDFAQ FWGTYEDIVR RARTGKLTAD DFSGVTISLT NPGGIGTVHS VPRLMEGQGT 310 320 330 340 350 360 IIGVGAMEYP AEFAGASTET LARMAISKVT TLTSTYDHRI IQGAQSGEYL RRIHQLLLGE 370 380 390 400 410 420 DEFYDEIFRS LRVPYEPVRW ITDIPTSHEG DLDHSARVQE LIHAFRVRGH LMADTNPLEF 430 440 450 460 470 480 TIRSHPDLDI RSHGLTLWDL DREFPVAGFA AHRMMSLRDV MGVLRDSYCR RVGIEYMHIQ 490 500 510 520 530 540 EPEERKWIQA RVERSAERPD PAEQLHVLER LGAAEAFESF LQTKYVGQRR FSLEGAESAI 550 560 570 580 590 600 PLLDEVLSRA SGAGMDEVVI GMAHRGRLNV LANIVGKSYR QIFAEFEGHL DPQTAHGSGD 610 620 630 640 650 660 VKYHLGAEGH YQCREGKQIP VSVVANPSHL EAVDPVLEGV VRAKQDILNK GIEGFTVLPV 670 680 690 700 710 720 LVHGDAAFAG QGVVAETLNL SQLRGYRTGG TVHLVINNQV GFTTSPTESR SSVYATDVAR 730 740 750 760 770 780 MVQAPIFHVN GDDPEACVRV AALAFDYREA FHKDVVIDMI CYRRRGHNEM DEPSFTQPLM 790 800 810 820 830 840 YDEIAAKRSV RKLYTEALIG RGDITRDQAE EAMKTYRLEL EKAFAETRDT TGDKPTPQPR 850 860 870 880 890 900 IVTTAEDAAA AAAVSTAVPL EVVKQVIDTQ VNLPADFTVH PRLRPQLERR AQMIENGSID 910 920 930 940 950 960 WACAETIAFG SLLLDGRSVR LTGQDSRRGT FGQRHAVVVD RYTGEDYAPL RSLRRADGGQ 970 980 990 1000 1010 1020 VGTFYAYDSL LSEYAAMGFE YGYSVARLDM LVLWEAQFGD FANGAQSIID EFLSAGEAKW 1030 1040 1050 1060 1070 1080 GQRNALTLLL PHGYEGQGPD HSSARMERFL LLCADDNMTV SAPSSPASYF HLLRRHTLSP 1090 1100 1110 1120 1130 1140 VRRPLVVFTP KSMLRLKAAA ASVQELTAGS WQPVIDDATI TDPSAVRRVL LSAGKVHWDL 1150 1160 1170 1180 1190 1200 AEARAHRDDK GQFALLRVEQ LYPTPGAEVA EALRRYPNAT DVVWVQEEPA NQGAYPHVAL 1210 1220 1230 1240 HLPEHLPAGL RLRRVSRKAS AAPASGSSKV HEKEQKALIE AAFAA

References

[1]

"Complete sequence of Frankia sp. EuI1c." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Mikhailova N., Beauchemin N. , Sen A., Sur S.A., Gtari M., Wall L., Tisa L., Woyke T. Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: EuI1c EMBL ADP78900.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002299 Genomic DNA. Translation: ADP78900.1.
RefSeq	YP_004014770.1. NC_014666.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADP78900; ADP78900; FraEuI1c_0822.
GeneID	9971241.
KEGG	fri:FraEuI1c_0822.
PATRIC	42613604. VBIFraSp2231_0858.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000259587.
KO	K00164.
Enzyme and pathway databases
BioCyc	FSP298654:GHN6-835-MONOMER.
Family and domain databases
Gene3D	3.30.559.10. 1 hit.
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
PANTHER	PTHR23152. PTHR23152. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E3IW58_FRASU

Accession

Primary (citable) accession number: E3IW58

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)