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Protein

Superoxide dismutase

Gene

Deval_2229

Organism
Desulfovibrio vulgaris (strain RCH1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Enzyme and pathway databases

BioCyciDVUL573059:GLCM-2282-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Deval_2229Imported
OrganismiDesulfovibrio vulgaris (strain RCH1)Imported
Taxonomic identifieri573059 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio
ProteomesiUP000001496: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 3535 PotentialImportedAdd
BLAST
Chaini36 – 238203 PotentialImportedPRO_5000653153Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK04564.
OMAiKFTETAT.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

E3IKF4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPCNVTRRSF MGLCAAAAVV TLGVPFFGAR VAHAAGEAEA FPMPPLPYPD
60 70 80 90 100
TALEPAISAR TISFHYGKHT AAYYANLNKA VAGTPMATMR LEDVVKSVAG
110 120 130 140 150
DPAKAGLFNN AAQSWNHTFY WAGMKPGGGG TPPAKVADAL KASFGSVEAC
160 170 180 190 200
MEQLSEAAKT QFASGWAWLA KGTENGKPVL KVMKTGNADN PMTQGLTPVL
210 220 230
TIDVWEHAYY LDYQNKRPDY VKAFFEKLVN WDEVATRL
Length:238
Mass (Da):25,609
Last modified:January 11, 2011 - v1
Checksum:iB56A6CC658F28408
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002297 Genomic DNA. Translation: ADP87373.1.
RefSeqiYP_005703011.1. NC_017310.1.

Genome annotation databases

EnsemblBacteriaiADP87373; ADP87373; Deval_2229.
GeneIDi12866828.
KEGGidvg:Deval_2229.
PATRICi42912129. VBIDesVul75230_2348.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002297 Genomic DNA. Translation: ADP87373.1.
RefSeqiYP_005703011.1. NC_017310.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADP87373; ADP87373; Deval_2229.
GeneIDi12866828.
KEGGidvg:Deval_2229.
PATRICi42912129. VBIDesVul75230_2348.

Phylogenomic databases

KOiK04564.
OMAiKFTETAT.

Enzyme and pathway databases

BioCyciDVUL573059:GLCM-2282-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
IPR006311. TAT_signal.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: RCH1Imported.

Entry informationi

Entry nameiE3IKF4_DESVR
AccessioniPrimary (citable) accession number: E3IKF4
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: January 7, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.