E3IKF4 (E3IKF4_DESVR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Superoxide dismutase RuleBase RU000414
EC=1.15.1.1 RuleBase RU000414

Gene names

Ordered Locus Names:

Deval_2229 EMBL ADP87373.1

Organism

Desulfovibrio vulgaris (strain RCH1) [Complete proteome] [HAMAP] EMBL ADP87373.1

Taxonomic identifier

573059 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfovibrionaceae › Desulfovibrio › Desulfovibrio vulgaris

Protein attributes

Sequence length	238 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Destroys radicals which are normally produced within the cells and which are toxic to biological systems By similarity. RuleBase RU000414
Catalytic activity	2 superoxide + 2 H+ = O2 + H2O2. RuleBase RU000414
Sequence similarities	Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Keywords
Domain	Signal EMBL ADP87373.1
Molecular function	Oxidoreductase RuleBase RU000414 EMBL ADP87373.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	superoxide metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 35	35	Potential EMBL ADP87373.1
	Chain	36 – 238	203	Potential		PRO_5000653153

Sequences

	Sequence		Length	Mass (Da)
	E3IKF4 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: B56A6CC658F28408	FASTA	238	25,609
	10 20 30 40 50 60 MPCNVTRRSF MGLCAAAAVV TLGVPFFGAR VAHAAGEAEA FPMPPLPYPD TALEPAISAR 70 80 90 100 110 120 TISFHYGKHT AAYYANLNKA VAGTPMATMR LEDVVKSVAG DPAKAGLFNN AAQSWNHTFY 130 140 150 160 170 180 WAGMKPGGGG TPPAKVADAL KASFGSVEAC MEQLSEAAKT QFASGWAWLA KGTENGKPVL 190 200 210 220 230 KVMKTGNADN PMTQGLTPVL TIDVWEHAYY LDYQNKRPDY VKAFFEKLVN WDEVATRL

References

[1]

"Complete sequence of chromosome of Desulfovibrio vulgaris RCH1." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Chakraborty R., Arkin A.P. , Dehal P., Wall J.D., Deutschbauer A.M., Hazen T.C., Woyke T. Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: RCH1 EMBL ADP87373.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002297 Genomic DNA. Translation: ADP87373.1.
RefSeq	YP_005703011.1. NC_017310.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADP87373; ADP87373; Deval_2229.
GeneID	12866828.
KEGG	dvg:Deval_2229.
PATRIC	42912129. VBIDesVul75230_2348.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K04564.
OMA	MAYQQPA.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019833. Mn/Fe_SOD_BS. IPR019832. Mn/Fe_SOD_C. IPR019831. Mn/Fe_SOD_N. IPR006311. TAT_signal. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF02777. Sod_Fe_C. 1 hit. PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PIRSF	PIRSF000349. SODismutase. 1 hit.
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit. SSF54719. SODismutase. 1 hit.
PROSITE	PS00088. SOD_MN. 1 hit. PS51318. TAT. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E3IKF4_DESVR

Accession

Primary (citable) accession number: E3IKF4

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)