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E3IJM3 (E3IJM3_DESVR) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Deval_2095 EMBL ADP87239.1
OrganismDesulfovibrio vulgaris (strain RCH1) [Complete proteome] [HAMAP] EMBL ADP87239.1
Taxonomic identifier573059 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfovibrionalesDesulfovibrionaceaeDesulfovibrio

Protein attributes

Sequence length551 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADP87239.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionligase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E3IJM3 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 1FF72AAEEB4974CB

FASTA55160,655
        10         20         30         40         50         60 
MDKLTFASYD EFLRVFSLDA PETFNFAFDV LDAMANETPD RLAIAHVDDA GVRRDYTFAW 

        70         80         90        100        110        120 
LADASARLAN ALKARGVRKG HRVMLVLHRR IEFWVSMLAL HRLGAVAIPA PAQLTPKDIV 

       130        140        150        160        170        180 
FRVERAQVRA VIVDDGITDR IEAARPDCPT LSVLVQCGGT PLPDGWCDYE ALCADASPSF 

       190        200        210        220        230        240 
PRPTAPDELA CGEDPLLIFF SSGTTGMPKM VEHVHTYPLG HLVTGMYWHD LRPGDLHLTV 

       250        260        270        280        290        300 
ADTGWGKAVW GKFYGQWMAG AAVFVYDFRG KFDPEALLDV VAKNGVTTFC APPTVYRFLV 

       310        320        330        340        350        360 
RADLSRYDLS KLRHCTTAGE LLNESVFHGW KAATGLSIYE GYGQTETTLQ IATLSCMEAK 

       370        380        390        400        410        420 
PGSIGRPMPG WGITLLDHEG KECPTGEEGE ICIRISDGLP VGLFRGYVED AEKTASVMFD 

       430        440        450        460        470        480 
GYYHTGDKAW MDEDGYLWFL GRVDDLIKSS GYRIGPFEVE SALVAHPAVV EAAVTGVPDP 

       490        500        510        520        530        540 
LRGQAVKATI VLAAGYEAGE VLTKELQDHV KKVTAPYKYP RIVEYVAELP KTISGKIKRA 

       550 
EIRQRDSEKS A 

« Hide

References

[1]"Complete sequence of chromosome of Desulfovibrio vulgaris RCH1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G., Chakraborty R., Arkin A.P. expand/collapse author list , Dehal P., Wall J.D., Deutschbauer A.M., Hazen T.C., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: RCH1 EMBL ADP87239.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002297 Genomic DNA. Translation: ADP87239.1.
RefSeqYP_005702877.1. NC_017310.1.

3D structure databases

ProteinModelPortalE3IJM3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP87239; ADP87239; Deval_2095.
GeneID12866691.
KEGGdvg:Deval_2095.
PATRIC42911821. VBIDesVul75230_2197.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01895.
OMAQFASEEH.

Enzyme and pathway databases

BioCycDVUL573059:GLCM-2145-MONOMER.

Family and domain databases

InterProIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEPS00455. AMP_BINDING. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3IJM3_DESVR
AccessionPrimary (citable) accession number: E3IJM3
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)