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E3IFL5 (E3IFL5_GEOS0) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:GY4MC1_3351 EMBL ADP76014.1
OrganismGeobacillus sp. (strain Y4.1MC1) [Complete proteome] [HAMAP] EMBL ADP76014.1
Taxonomic identifier581103 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains TRAM domain. SAAS SAAS010280

Sequences

Sequence LengthMass (Da)Tools
E3IFL5 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 38F62227E7CD0EC9

FASTA45951,741
        10         20         30         40         50         60 
MTKKTITIKK GQQFPLTIKR LGINGEGVGY FKKQVVFVPG ALPGEEVVVE ATDIHLKYAE 

        70         80         90        100        110        120 
AKIKKIRKRS PHRVMPRCPV YEQCGGCQLQ HLDYEAQLRE KRDIVIQALE RHCRLPVETL 

       130        140        150        160        170        180 
EIRPTIGMED PWHYRNKSQF QVGMKKGEVI AGLYGLNSHQ LIDISECLIQ HPATNRVTNM 

       190        200        210        220        230        240 
VKMILQDLRI PIYNERTQTG LVRTIVARVG FRTGDVQLVL ITAKKEIPRK ELLIAEIKRR 

       250        260        270        280        290        300 
LPEVKSIVQN INGQKTSLIF GEESLLLEGE EYIQEVLGDL SFELSARAFF QLNPVQTVKL 

       310        320        330        340        350        360 
YDEVKKAAAL TGTEKVVDAY CGVGTIGLWL AKDAGEIRGM DVIPEAIEDA KKNAKKHGFA 

       370        380        390        400        410        420 
NATYVSGKAE ALLPKWVKEG WKPDVIVVDP PRTGCDEQLL KTILKVKPQR IVYVSCNPSS 

       430        440        450 
LARDIDVLSK FYKVDYIQPV DMFPHTAHVE CVAKLTLKL 

« Hide

References

[1]"Complete sequence of chromosome of Geobacillus sp. Y4.1MC1."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G. expand/collapse author list , Brumm P., Mead D., Woyke T.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Y4.1MC1 EMBL ADP76014.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002293 Genomic DNA. Translation: ADP76014.1.
RefSeqYP_003990625.1. NC_014650.1.

3D structure databases

ProteinModelPortalE3IFL5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP76014; ADP76014; GY4MC1_3351.
GeneID9930256.
KEGGgmc:GY4MC1_3351.
PATRIC42637190. VBIGeoSp111282_3694.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000029867.
KOK00557.
OMAYISCNAS.

Enzyme and pathway databases

BioCycGSP581103:GHT2-3451-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProIPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view]
PfamPF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsTIGR00479. rumA. 1 hit.
PROSITEPS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3IFL5_GEOS0
AccessionPrimary (citable) accession number: E3IFL5
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)