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E3IFL5

- E3IFL5_GEOS0

UniProt

E3IFL5 - E3IFL5_GEOS0

Protein
Submitted name:

RNA methyltransferase, TrmA family

Gene

GY4MC1_3351

Organism
Geobacillus sp. (strain Y4.1MC1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. RNA binding Source: InterPro
    2. RNA methyltransferase activity Source: InterPro

    GO - Biological processi

    1. RNA processing Source: InterPro

    Keywords - Molecular functioni

    MethyltransferaseSAAS annotationImported, Transferase

    Keywords - Ligandi

    S-adenosyl-L-methionineSAAS annotation

    Enzyme and pathway databases

    BioCyciGSP581103:GHT2-3451-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    RNA methyltransferase, TrmA familyImported
    Gene namesi
    Ordered Locus Names:GY4MC1_3351Imported
    OrganismiGeobacillus sp. (strain Y4.1MC1)Imported
    Taxonomic identifieri581103 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
    ProteomesiUP000002034: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE3IFL5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Contains TRAM domain.SAAS annotation

    Phylogenomic databases

    HOGENOMiHOG000029867.
    KOiK00557.
    OMAiYISCNAS.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    3.40.50.150. 1 hit.
    InterProiIPR001566. 23S_rRNA_MeTrfase_RlmD.
    IPR012340. NA-bd_OB-fold.
    IPR029063. SAM-dependent_MTases-like.
    IPR002792. TRAM_dom.
    IPR010280. U5_MeTrfase_fam.
    [Graphical view]
    PfamiPF01938. TRAM. 1 hit.
    PF05958. tRNA_U5-meth_tr. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    SSF53335. SSF53335. 1 hit.
    TIGRFAMsiTIGR00479. rumA. 1 hit.
    PROSITEiPS50926. TRAM. 1 hit.
    PS01230. TRMA_1. 1 hit.
    PS01231. TRMA_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3IFL5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTKKTITIKK GQQFPLTIKR LGINGEGVGY FKKQVVFVPG ALPGEEVVVE    50
    ATDIHLKYAE AKIKKIRKRS PHRVMPRCPV YEQCGGCQLQ HLDYEAQLRE 100
    KRDIVIQALE RHCRLPVETL EIRPTIGMED PWHYRNKSQF QVGMKKGEVI 150
    AGLYGLNSHQ LIDISECLIQ HPATNRVTNM VKMILQDLRI PIYNERTQTG 200
    LVRTIVARVG FRTGDVQLVL ITAKKEIPRK ELLIAEIKRR LPEVKSIVQN 250
    INGQKTSLIF GEESLLLEGE EYIQEVLGDL SFELSARAFF QLNPVQTVKL 300
    YDEVKKAAAL TGTEKVVDAY CGVGTIGLWL AKDAGEIRGM DVIPEAIEDA 350
    KKNAKKHGFA NATYVSGKAE ALLPKWVKEG WKPDVIVVDP PRTGCDEQLL 400
    KTILKVKPQR IVYVSCNPSS LARDIDVLSK FYKVDYIQPV DMFPHTAHVE 450
    CVAKLTLKL 459
    Length:459
    Mass (Da):51,741
    Last modified:January 11, 2011 - v1
    Checksum:i38F62227E7CD0EC9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002293 Genomic DNA. Translation: ADP76014.1.
    RefSeqiWP_013401632.1. NC_014650.1.
    YP_003990625.1. NC_014650.1.

    Genome annotation databases

    EnsemblBacteriaiADP76014; ADP76014; GY4MC1_3351.
    GeneIDi9930256.
    KEGGigmc:GY4MC1_3351.
    PATRICi42637190. VBIGeoSp111282_3694.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002293 Genomic DNA. Translation: ADP76014.1 .
    RefSeqi WP_013401632.1. NC_014650.1.
    YP_003990625.1. NC_014650.1.

    3D structure databases

    ProteinModelPortali E3IFL5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADP76014 ; ADP76014 ; GY4MC1_3351 .
    GeneIDi 9930256.
    KEGGi gmc:GY4MC1_3351.
    PATRICi 42637190. VBIGeoSp111282_3694.

    Phylogenomic databases

    HOGENOMi HOG000029867.
    KOi K00557.
    OMAi YISCNAS.

    Enzyme and pathway databases

    BioCyci GSP581103:GHT2-3451-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    3.40.50.150. 1 hit.
    InterProi IPR001566. 23S_rRNA_MeTrfase_RlmD.
    IPR012340. NA-bd_OB-fold.
    IPR029063. SAM-dependent_MTases-like.
    IPR002792. TRAM_dom.
    IPR010280. U5_MeTrfase_fam.
    [Graphical view ]
    Pfami PF01938. TRAM. 1 hit.
    PF05958. tRNA_U5-meth_tr. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    SSF53335. SSF53335. 1 hit.
    TIGRFAMsi TIGR00479. rumA. 1 hit.
    PROSITEi PS50926. TRAM. 1 hit.
    PS01230. TRMA_1. 1 hit.
    PS01231. TRMA_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Geobacillus sp. Y4.1MC1."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G.
      , Brumm P., Mead D., Woyke T.
      Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y4.1MC1Imported.

    Entry informationi

    Entry nameiE3IFL5_GEOS0
    AccessioniPrimary (citable) accession number: E3IFL5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3