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E3IFL5

- E3IFL5_GEOS0

UniProt

E3IFL5 - E3IFL5_GEOS0

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Protein
Submitted name: RNA methyltransferase, TrmA family
Gene
GY4MC1_3351
Organism
Geobacillus sp. (strain Y4.1MC1)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. RNA methyltransferase activity Source: InterPro

GO - Biological processi

  1. RNA processing Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

MethyltransferaseSAAS annotationsImported, Transferase

Keywords - Ligandi

S-adenosyl-L-methionineSAAS annotations

Enzyme and pathway databases

BioCyciGSP581103:GHT2-3451-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
RNA methyltransferase, TrmA familyImported
Gene namesi
Ordered Locus Names:GY4MC1_3351Imported
OrganismiGeobacillus sp. (strain Y4.1MC1)Imported
Taxonomic identifieri581103 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000002034: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3IFL5.

Family & Domainsi

Sequence similaritiesi

Contains TRAM domain.SAAS annotations

Phylogenomic databases

HOGENOMiHOG000029867.
KOiK00557.
OMAiYISCNAS.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProiIPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view]
PfamiPF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsiTIGR00479. rumA. 1 hit.
PROSITEiPS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3IFL5-1 [UniParc]FASTAAdd to Basket

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MTKKTITIKK GQQFPLTIKR LGINGEGVGY FKKQVVFVPG ALPGEEVVVE    50
ATDIHLKYAE AKIKKIRKRS PHRVMPRCPV YEQCGGCQLQ HLDYEAQLRE 100
KRDIVIQALE RHCRLPVETL EIRPTIGMED PWHYRNKSQF QVGMKKGEVI 150
AGLYGLNSHQ LIDISECLIQ HPATNRVTNM VKMILQDLRI PIYNERTQTG 200
LVRTIVARVG FRTGDVQLVL ITAKKEIPRK ELLIAEIKRR LPEVKSIVQN 250
INGQKTSLIF GEESLLLEGE EYIQEVLGDL SFELSARAFF QLNPVQTVKL 300
YDEVKKAAAL TGTEKVVDAY CGVGTIGLWL AKDAGEIRGM DVIPEAIEDA 350
KKNAKKHGFA NATYVSGKAE ALLPKWVKEG WKPDVIVVDP PRTGCDEQLL 400
KTILKVKPQR IVYVSCNPSS LARDIDVLSK FYKVDYIQPV DMFPHTAHVE 450
CVAKLTLKL 459
Length:459
Mass (Da):51,741
Last modified:January 11, 2011 - v1
Checksum:i38F62227E7CD0EC9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002293 Genomic DNA. Translation: ADP76014.1.
RefSeqiWP_013401632.1. NC_014650.1.
YP_003990625.1. NC_014650.1.

Genome annotation databases

EnsemblBacteriaiADP76014; ADP76014; GY4MC1_3351.
GeneIDi9930256.
KEGGigmc:GY4MC1_3351.
PATRICi42637190. VBIGeoSp111282_3694.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002293 Genomic DNA. Translation: ADP76014.1 .
RefSeqi WP_013401632.1. NC_014650.1.
YP_003990625.1. NC_014650.1.

3D structure databases

ProteinModelPortali E3IFL5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADP76014 ; ADP76014 ; GY4MC1_3351 .
GeneIDi 9930256.
KEGGi gmc:GY4MC1_3351.
PATRICi 42637190. VBIGeoSp111282_3694.

Phylogenomic databases

HOGENOMi HOG000029867.
KOi K00557.
OMAi YISCNAS.

Enzyme and pathway databases

BioCyci GSP581103:GHT2-3451-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
3.40.50.150. 1 hit.
InterProi IPR001566. 23S_rRNA_MeTrfase_RlmD.
IPR012340. NA-bd_OB-fold.
IPR029063. SAM-dependent_MTases-like.
IPR002792. TRAM_dom.
IPR010280. U5_MeTrfase_fam.
[Graphical view ]
Pfami PF01938. TRAM. 1 hit.
PF05958. tRNA_U5-meth_tr. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
SSF53335. SSF53335. 1 hit.
TIGRFAMsi TIGR00479. rumA. 1 hit.
PROSITEi PS50926. TRAM. 1 hit.
PS01230. TRMA_1. 1 hit.
PS01231. TRMA_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Geobacillus sp. Y4.1MC1."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Chertkov O., Zhang X., Detter J.C., Han C., Tapia R., Land M., Hauser L., Jeffries C., Kyrpides N., Ivanova N., Ovchinnikova G.
    , Brumm P., Mead D., Woyke T.
    Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y4.1MC1Imported.

Entry informationi

Entry nameiE3IFL5_GEOS0
AccessioniPrimary (citable) accession number: E3IFL5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: September 3, 2014
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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