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E3I3F0 (E3I3F0_RHOVT) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Rvan_3416 EMBL ADP72598.1
OrganismRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) [Complete proteome] [HAMAP] EMBL ADP72598.1
Taxonomic identifier648757 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeRhodomicrobium

Protein attributes

Sequence length516 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E3I3F0 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: E28006950D92412C

FASTA51656,792
        10         20         30         40         50         60 
MASEKLTEIS QHPSPSEDAG ADVADYLLGS DLSKLRGWVE ARSASFLRSA DAGERSPIRR 

        70         80         90        100        110        120 
VREKFRSCEV PDTAMALDDY LSLLDQDVLP HCSSLASPRY LGHMTSPIPG FLPELGRLVQ 

       130        140        150        160        170        180 
TLNQNVVKME TSGSLTFVER QVLGMLHKET YGFDTAFYDR RVQDRDSTLG LFASGGTIAN 

       190        200        210        220        230        240 
LTALRAAKQR ASVHAGGGAR MAVIGSELMH YSFAKGADLM GLELRRVPVD EQNRMLPAAL 

       250        260        270        280        290        300 
EREIEACEAE GVTVAALIAI AGTTEFGSVD PLASICRLGQ ARNIHVHVDA AWGGGFLLSP 

       310        320        330        340        350        360 
RNRHILAGIE LADTVTIDGH KQLMVPLGCG MLFFRDPEVS KTIMHHAPYA VRPNSEDQGR 

       370        380        390        400        410        420 
FTLEGTRPAT AIYVHAALHL IGKSVYDALF SASLERTRIM ARHIEGMPEF ELTSRPDMNI 

       430        440        450        460        470        480 
LTYRYIPEAM RGTTPGPADN HRISRFNVAL QRAQRDKGDS FVSRTFRPVS RHGDEPLALL 

       490        500        510 
RAVLLNPRTT EDDILFLLRD QVGIARELEN SPAFHE 

« Hide

References

[1]"Genome sequences of eight morphologically diverse alphaproteobacteria."
US DOE Joint Genome Institute
Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V.
J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002292 Genomic DNA. Translation: ADP72598.1.
RefSeqYP_004013697.1. NC_014664.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP72598; ADP72598; Rvan_3416.
GeneID9934225.
KEGGrva:Rvan_3416.
PATRIC42674281. VBIRhoVan113057_3601.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000282553.
KOK01580.

Enzyme and pathway databases

BioCycRVAN648757:GHZT-3462-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3I3F0_RHOVT
AccessionPrimary (citable) accession number: E3I3F0
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)