E3I175 (E3I175_RHOVT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L20 RuleBase RU000560 HAMAP-Rule MF_00382

Gene names

Name:	rplT HAMAP-Rule MF_00382
Ordered Locus Names:	Rvan_0812

Organism

Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) [Complete proteome] [HAMAP] EMBL ADP70088.1

Taxonomic identifier

648757 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Hyphomicrobiaceae › Rhodomicrobium › Rhodomicrobium vannielii

Protein attributes

Sequence length	124 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit By similarity. RuleBase RU000560 HAMAP-Rule MF_00382
Sequence similarities	Belongs to the ribosomal protein L20P family. RuleBase RU000560 HAMAP-Rule MF_00382

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding RuleBase RU000560 HAMAP-Rule MF_00382
Molecular function	Ribonucleoprotein Ribosomal protein RuleBase RU000560 HAMAP-Rule MF_00382 EMBL ADP70088.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	ribosomal large subunit assembly Inferred from electronic annotation. Source: HAMAP translation Inferred from electronic annotation. Source: InterPro
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3I175 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: 58670A509DF62C54	FASTA	124	14,080
	10 20 30 40 50 60 MSRVKRGVAA HARHKKVLEQ AKGFYGRRKN TIRIAKQAVE KSLQYAYRDR RTKKRNFRSL 70 80 90 100 110 120 WIQRINAATR EHGLTYGRFI DGLNKAGIEI DRKVLSDMAI TDPTGFAALV GKAREALPAE LQSA

References

[1]

"Genome sequences of eight morphologically diverse alphaproteobacteria." US DOE Joint Genome Institute Brown P.J., Kysela D.T., Buechlein A., Hemmerich C., Brun Y.V. J. Bacteriol. 193:4567-4568(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002292 Genomic DNA. Translation: ADP70088.1.
RefSeq	YP_004011187.1. NC_014664.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADP70088; ADP70088; Rvan_0812.
GeneID	9931585.
KEGG	rva:Rvan_0812.
PATRIC	42668708. VBIRhoVan113057_0852.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000035046.
KO	K02887.
Enzyme and pathway databases
BioCyc	RVAN648757:GHZT-821-MONOMER.
Family and domain databases
HAMAP	MF_00382. Ribosomal_L20.
InterPro	IPR005813. Ribosomal_L20. [Graphical view]
PANTHER	PTHR10986. PTHR10986. 1 hit.
Pfam	PF00453. Ribosomal_L20. 1 hit. [Graphical view]
PRINTS	PR00062. RIBOSOMALL20.
TIGRFAMs	TIGR01032. rplT_bact. 1 hit.
PROSITE	PS00937. RIBOSOMAL_L20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

E3I175_RHOVT

Accession

Primary (citable) accession number: E3I175

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)