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Protein

Superoxide dismutase

Gene

Rvan_1840

Organism
Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi57Divalent metal cationUniRule annotation1
Metal bindingi112Divalent metal cationUniRule annotation1
Metal bindingi194Divalent metal cationUniRule annotation1
Metal bindingi198Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciRVAN648757:G1GOP-1863-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Rvan_1840Imported
OrganismiRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)Imported
Taxonomic identifieri648757 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeRhodomicrobium
Proteomesi
  • UP000001399 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi648757.Rvan_1840

Structurei

3D structure databases

ProteinModelPortaliE3I047
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 120Sod_Fe_NInterPro annotationAdd BLAST88
Domaini126 – 226Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013583
KOiK04564
OMAiYEGWKGE
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

E3I047-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIAVNRRAFL TGAAAFSTFI VIDRSFAQAS GPFKLPPLPY AFDALEPTID
60 70 80 90 100
AKTMELHHDK HHAAYVNNLN AALKDHPKIA EWPLSQILAK LDEIPDTIRT
110 120 130 140 150
TVRNNAGGHA NHTMFWQVMA KDGGEPQGAL KAAIDRDFGG LDKLKEQLNT
160 170 180 190 200
AGTKVFGSGW VFVTVDKDGK LALVAAPNQD TPLMKGTRVL FGNDVWEHAY
210 220 230
YLKYQNRRPD YLKAWWDVVN WKAVGDRYAA AKAGDLDI
Length:238
Mass (Da):26,402
Last modified:January 11, 2011 - v1
Checksum:i4A9D6F5C9AF76527
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002292 Genomic DNA Translation: ADP71082.1
RefSeqiWP_013419472.1, NC_014664.1

Genome annotation databases

EnsemblBacteriaiADP71082; ADP71082; Rvan_1840
KEGGirva:Rvan_1840

Similar proteinsi

Entry informationi

Entry nameiE3I047_RHOVT
AccessioniPrimary (citable) accession number: E3I047
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: March 28, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health