Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Superoxide dismutase

Gene

Rvan_1840

Organism
Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi57Divalent metal cationUniRule annotation1
Metal bindingi112Divalent metal cationUniRule annotation1
Metal bindingi194Divalent metal cationUniRule annotation1
Metal bindingi198Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciRVAN648757:GHZT-1822-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:Rvan_1840Imported
OrganismiRhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299)Imported
Taxonomic identifieri648757 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaeRhodomicrobium
Proteomesi
  • UP000001399 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi648757.Rvan_1840.

Structurei

3D structure databases

ProteinModelPortaliE3I047.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 120Sod_Fe_NInterPro annotationAdd BLAST88
Domaini126 – 226Sod_Fe_CInterPro annotationAdd BLAST101

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4. Bacteria.
COG0605. LUCA.
HOGENOMiHOG000013583.
KOiK04564.
OMAiDSPLMHG.
OrthoDBiPOG091H03Q7.

Family and domain databases

InterProiView protein in InterPro
IPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
PfamiView protein in Pfam
PF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiView protein in PROSITE
PS00088. SOD_MN. 1 hit.

Sequencei

Sequence statusi: Complete.

E3I047-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIAVNRRAFL TGAAAFSTFI VIDRSFAQAS GPFKLPPLPY AFDALEPTID
60 70 80 90 100
AKTMELHHDK HHAAYVNNLN AALKDHPKIA EWPLSQILAK LDEIPDTIRT
110 120 130 140 150
TVRNNAGGHA NHTMFWQVMA KDGGEPQGAL KAAIDRDFGG LDKLKEQLNT
160 170 180 190 200
AGTKVFGSGW VFVTVDKDGK LALVAAPNQD TPLMKGTRVL FGNDVWEHAY
210 220 230
YLKYQNRRPD YLKAWWDVVN WKAVGDRYAA AKAGDLDI
Length:238
Mass (Da):26,402
Last modified:January 11, 2011 - v1
Checksum:i4A9D6F5C9AF76527
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002292 Genomic DNA. Translation: ADP71082.1.
RefSeqiWP_013419472.1. NC_014664.1.

Genome annotation databases

EnsemblBacteriaiADP71082; ADP71082; Rvan_1840.
KEGGirva:Rvan_1840.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiE3I047_RHOVT
AccessioniPrimary (citable) accession number: E3I047
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 7, 2017
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported