E3HB04 (E3HB04_ILYPC) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL ADO82153.1
EC=5.1.1.1 EMBL ADO82153.1

Gene names

Ordered Locus Names:

Ilyop_0365 EMBL ADO82153.1

Organism

Ilyobacter polytropus (strain DSM 2926 / CuHBu1) [Complete proteome] [HAMAP] EMBL ADO82153.1

Taxonomic identifier

572544 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fusobacteria › Fusobacteriia › Fusobacteriales › Fusobacteriaceae › Ilyobacter › Ilyobacter polytropus

Protein attributes

Sequence length	377 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL ADO82153.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3HB04 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: C817048365C72E28	FASTA	377	42,102
	10 20 30 40 50 60 MRAWADINLD NLIYNLNIIK EFAGSKKIMC VIKADGYGMG AVECARILSE NGVENFGVAC 70 80 90 100 110 120 YEEGYELYKA GIKGEILLLG ATPFENIADA VKCGFQITIS SFEQIDFLRR NNLHPEVHIK 130 140 150 160 170 180 VDTGMGRLGF SHEEALKAIK IIRDENIADI VGVYSHLSVA DMPEKDQFTL DQIEKFKVFE 190 200 210 220 230 240 KMESIKYKHI LNSSGLLRFA DATESNLVRV GIILHGVVPF ESELQKKFKP VFSFKTKIIF 250 260 270 280 290 300 LNKITEKTYV SYGNTETAEP GDLIATMAVG YADGFVREFS NGGIVEIDGV GCRVIGKICM 310 320 330 340 350 360 DMTMIKIPEE LKDKVQVGTE VTIIGKDILK KAECIGTIPY EIMIGLGRRV ARFYIKNGKV 370 LKFKSLQESE AKEFQKG

References

[1]

"Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1)." MSikorski J., Chertkov O., Lapidus A., Nolan M., Lucas S., Glavina Del Rio T., Tice H., Cheng J., Tapia R., Han C., Goodwin L., Pitluck S., Liolios K., Ivanova N., Mavromatis K., Mikhailova N., Pati A., Chen A. , Palaniappan K., Land M., Hauser L., Cheng Y., Jeffries C., Brambilla E., Yasawong M., Rohde M., Pukall R., Spring S., Goker, M., Woyke T., Bristow J., Eisen J., Markowitz V., Hugenholtz P., Kyrpides N., Klenk H. Stand. Genomic Sci. 3:304-314(2010) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 2926 / CuHBu1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002281 Genomic DNA. Translation: ADO82153.1.
RefSeq	YP_003966501.1. NC_014632.1.
3D structure databases
ProteinModelPortal	E3HB04.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADO82153; ADO82153; Ilyop_0365.
GeneID	9867865.
KEGG	ipo:Ilyop_0365.
PATRIC	42644383. VBIIlyPol34265_0378.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031444.
KO	K01775.
Enzyme and pathway databases
BioCyc	IPOL572544:GJ9I-382-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E3HB04_ILYPC

Accession

Primary (citable) accession number: E3HB04

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)