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E3HB04

- E3HB04_ILYPC

UniProt

E3HB04 - E3HB04_ILYPC

Protein

Alanine racemase

Gene

Ilyop_0365

Organism
Ilyobacter polytropus (strain DSM 2926 / CuHBu1)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    • Comment

    Functioni

    Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

    Catalytic activityi

    L-alanine = D-alanine.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei33 – 331Proton acceptor; specific for D-alanineUniRule annotation
    Binding sitei127 – 1271SubstrateUniRule annotation
    Active sitei252 – 2521Proton acceptor; specific for L-alanineUniRule annotation
    Binding sitei300 – 3001Substrate; via amide nitrogenUniRule annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: UniProtKB-HAMAP
    2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-alanine biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciIPOL572544:GJ9I-382-MONOMER.
    UniPathwayiUPA00042; UER00497.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
    Gene namesi
    Ordered Locus Names:Ilyop_0365Imported
    OrganismiIlyobacter polytropus (strain DSM 2926 / CuHBu1)Imported
    Taxonomic identifieri572544 [NCBI]
    Taxonomic lineageiBacteriaFusobacteriaFusobacterialesFusobacteriaceaeIlyobacter
    ProteomesiUP000006875: Chromosome

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei33 – 331N6-(pyridoxal phosphate)lysineUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE3HB04.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alanine racemase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000031444.
    KOiK01775.
    OMAiLWQLEAI.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E3HB04-1 [UniParc]FASTAAdd to Basket

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    MRAWADINLD NLIYNLNIIK EFAGSKKIMC VIKADGYGMG AVECARILSE    50
    NGVENFGVAC YEEGYELYKA GIKGEILLLG ATPFENIADA VKCGFQITIS 100
    SFEQIDFLRR NNLHPEVHIK VDTGMGRLGF SHEEALKAIK IIRDENIADI 150
    VGVYSHLSVA DMPEKDQFTL DQIEKFKVFE KMESIKYKHI LNSSGLLRFA 200
    DATESNLVRV GIILHGVVPF ESELQKKFKP VFSFKTKIIF LNKITEKTYV 250
    SYGNTETAEP GDLIATMAVG YADGFVREFS NGGIVEIDGV GCRVIGKICM 300
    DMTMIKIPEE LKDKVQVGTE VTIIGKDILK KAECIGTIPY EIMIGLGRRV 350
    ARFYIKNGKV LKFKSLQESE AKEFQKG 377
    Length:377
    Mass (Da):42,102
    Last modified:January 11, 2011 - v1
    Checksum:iC817048365C72E28
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002281 Genomic DNA. Translation: ADO82153.1.
    RefSeqiWP_013386823.1. NC_014632.1.
    YP_003966501.1. NC_014632.1.

    Genome annotation databases

    EnsemblBacteriaiADO82153; ADO82153; Ilyop_0365.
    GeneIDi9867865.
    KEGGiipo:Ilyop_0365.
    PATRICi42644383. VBIIlyPol34265_0378.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002281 Genomic DNA. Translation: ADO82153.1 .
    RefSeqi WP_013386823.1. NC_014632.1.
    YP_003966501.1. NC_014632.1.

    3D structure databases

    ProteinModelPortali E3HB04.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO82153 ; ADO82153 ; Ilyop_0365 .
    GeneIDi 9867865.
    KEGGi ipo:Ilyop_0365.
    PATRICi 42644383. VBIIlyPol34265_0378.

    Phylogenomic databases

    HOGENOMi HOG000031444.
    KOi K01775.
    OMAi LWQLEAI.

    Enzyme and pathway databases

    UniPathwayi UPA00042 ; UER00497 .
    BioCyci IPOL572544:GJ9I-382-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 2926 / CuHBu1Imported.

    Entry informationi

    Entry nameiE3HB04_ILYPC
    AccessioniPrimary (citable) accession number: E3HB04
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3