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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mfer_0241

Organism
Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMFER523846:GC24-254-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mfer_0241Imported
OrganismiMethanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S)Imported
Taxonomic identifieri523846 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanobacteriaMethanobacterialesMethanothermaceaeMethanothermus
ProteomesiUP000002315 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3GXL2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.

Sequencei

Sequence statusi: Complete.

E3GXL2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQIDWNKTCG LKKVHYVCPK CGNEFKKSLQ RMLKKFNLDI ERIEKGIKSG
60 70 80 90 100
KIKFYESLGF PTLHFKKDVG KLEAGTVIYF HKKVDIIRGF PKIRRTLLLS
110 120 130 140 150
PTIEKHFKDF VAVEEKMNGY NVRIAKVGEK IVALTRGGFI CPFTTNKVME
160 170 180 190 200
LLNLEDFFND FPDLIVCGEM IGTHNPYVPH YYPEVGKLGF RIFDIRRKVS
210 220 230 240 250
NEALSVYEKN KLLKKYNLPG VRLFGIFDVE EAPKKIEEII KELEKENREG
260 270 280 290 300
VVIKDPEMKI PPVKYTCGRA HHSELKFAFT FPFDFGRHFL FSRVIREGFQ
310 320 330 340 350
SYEFKESREE MRERAKRIGE SILLPMIETI KKIAENGVAH EDVIIDVETK
360 370 380 390
AEAEKLIRHL RKQGVIAKLV SYKDGKAKIR RIYQSTTDKI KHYLNGGLY
Length:399
Mass (Da):46,449
Last modified:January 10, 2011 - v1
Checksum:iA9128027FA79A503
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002278 Genomic DNA. Translation: ADP77044.1.
RefSeqiYP_004003806.1. NC_014658.1.

Genome annotation databases

EnsemblBacteriaiADP77044; ADP77044; Mfer_0241.
GeneIDi9961956.
KEGGimfv:Mfer_0241.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002278 Genomic DNA. Translation: ADP77044.1.
RefSeqiYP_004003806.1. NC_014658.1.

3D structure databases

ProteinModelPortaliE3GXL2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADP77044; ADP77044; Mfer_0241.
GeneIDi9961956.
KEGGimfv:Mfer_0241.

Phylogenomic databases

HOGENOMiHOG000224394.
KOiK07468.
OMAiEEKMNGY.

Enzyme and pathway databases

BioCyciMFER523846:GC24-254-MONOMER.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSiPR01048. Y414FAMILY.
TIGRFAMsiTIGR01209. TIGR01209. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43054 / DSM 2088 / JCM 10308 / V24 SImported.

Entry informationi

Entry nameiE3GXL2_METFV
AccessioniPrimary (citable) accession number: E3GXL2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 10, 2011
Last sequence update: January 10, 2011
Last modified: February 3, 2015
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.