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E3GJR7 (E3GJR7_EUBLK) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:ELI_0972 EMBL ADO35975.1
OrganismEubacterium limosum (strain KIST612) [Complete proteome] [HAMAP] EMBL ADO35975.1
Taxonomic identifier903814 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesEubacteriaceaeEubacterium

Protein attributes

Sequence length472 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E3GJR7 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 9A32576151576E1E

FASTA47254,332
        10         20         30         40         50         60 
MLYSKDDQDK LKDRYLTPIF GTEASDEPLP KYKLRKDPVE PEVAYRLIKD DLLDEGSARL 

        70         80         90        100        110        120 
NLSTFCQTYM EPEATKIMAE TLEKNAIDKS EYPQTTELEN RCVNMIADLW HAPDDEKFLG 

       130        140        150        160        170        180 
TSTVGSSEAC MLGGMAMKFR WRNNAIKQGL DVKAKKPNLV ISSGYQVCWE KFCVYWDIEM 

       190        200        210        220        230        240 
RLVPLDEQHM SMNMDTVMDF VDEYTIGIVG IMGITYTGKF DDIKALDTLV EDYNQKNPKF 

       250        260        270        280        290        300 
PIYIHVDGAS GGMFAPFIEP DLEWDFRLKN VVSINTSGHK YGLVYPGIGW VLWRDEKWLP 

       310        320        330        340        350        360 
KELIFSVSYL GGSLPTMAIN FSRSASQIIG QYYNFLRYGY EGYKKIHERT RDVAMYISKE 

       370        380        390        400        410        420 
LEKTGLFEIY NDGSNLPIVC WKMKKDANKE WNLYDLADRI RMKGWQVPAY PLPENLQDDI 

       430        440        450        460        470 
IQRVVVRADL SEQLGVLLME DMNRAIKELD EAHILPHGGD QVNNKGVYGF TH 

« Hide

References

« Hide 'large scale' references
[1]"The genome sequence of Eubacterium limosum (strain KIST612)."
Roh H., Ko H.-J., Kim D., Choi D.G., Park S., Kim S., Kim K.H., Chang I.S., Choi I.-G.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: KIST612.
[2]Roh H., Ko H.-J., Kim D., Choi D.G., Park S., Kim S., Kim K.H., Chang I.S., Choi I.-G.
Submitted (SEP-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: KIST612.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002273 Genomic DNA. Translation: ADO35975.1.
RefSeqYP_003958938.1. NC_014624.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO35975; ADO35975; ELI_0972.
GeneID9882871.
KEGGelm:ELI_0972.
PATRIC42605073. VBIEubLim172772_0910.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.

Enzyme and pathway databases

BioCycELIM903814:GH0C-970-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3GJR7_EUBLK
AccessionPrimary (citable) accession number: E3GJR7
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)