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Protein

Transport permease protein

Gene

Entcl_1653

Organism
Enterobacter lignolyticus (strain SCF1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Transport permease proteinUniRule annotation
Gene namesi
Ordered Locus Names:Entcl_1653Imported
OrganismiEnterobacter lignolyticus (strain SCF1)Imported
Taxonomic identifieri701347 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEnterobacterEnterobacter cloacae complex
Proteomesi
  • UP000006872 Componenti: Chromosome

Subcellular locationi

  • Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei26 – 51HelicalUniRule annotationAdd BLAST26
Transmembranei63 – 81HelicalUniRule annotationAdd BLAST19
Transmembranei102 – 129HelicalUniRule annotationAdd BLAST28
Transmembranei135 – 161HelicalUniRule annotationAdd BLAST27
Transmembranei173 – 194HelicalUniRule annotationAdd BLAST22
Transmembranei229 – 247HelicalUniRule annotationAdd BLAST19

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneUniRule annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi701347.Entcl_1653.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 217ABC2_membraneInterPro annotationAdd BLAST208

Sequence similaritiesi

Belongs to the ABC-2 integral membrane protein family.UniRule annotation
Contains 1 ABC transmembrane type-2 domain.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

eggNOGiENOG4105MFV. Bacteria.
COG1682. LUCA.
HOGENOMiHOG000283025.
KOiK09690.
OMAiMAYIVEG.
OrthoDBiPOG091H06FP.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3GCY3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSTNVKDLV FQIAKRNIYL KYKGSILGVF WSFLNPLFLL AVYTFIFGFA
60 70 80 90 100
FKTKWGGESL ASYPIILFSG LIFHFFIIEL LSSSSQLISG NANYVKKVVF
110 120 130 140 150
PLEVLVISNF LSQIFNLLIG AALLSIAVLV TGGNIFKVIF ALVIVLPPFM
160 170 180 190 200
ILTLGISYLF SSLGAFIKDI THVVNLASTL FLFVSPILFP MSVFPDVVKW
210 220 230 240 250
IVYLNPVSLV VIEYRAIAFH VESFSVYGYA AYCTAAFVIF LLGRWVFNRL

SRGFADVV
Length:258
Mass (Da):28,802
Last modified:January 11, 2011 - v1
Checksum:iBEE1B4BAEA4832F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002272 Genomic DNA. Translation: ADO47913.1.
RefSeqiWP_013365657.1. NC_014618.1.

Genome annotation databases

EnsemblBacteriaiADO47913; ADO47913; Entcl_1653.
GeneIDi24909279.
KEGGiesc:Entcl_1653.
PATRICi42597399. VBIEntClo171306_1678.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002272 Genomic DNA. Translation: ADO47913.1.
RefSeqiWP_013365657.1. NC_014618.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi701347.Entcl_1653.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO47913; ADO47913; Entcl_1653.
GeneIDi24909279.
KEGGiesc:Entcl_1653.
PATRICi42597399. VBIEntClo171306_1678.

Phylogenomic databases

eggNOGiENOG4105MFV. Bacteria.
COG1682. LUCA.
HOGENOMiHOG000283025.
KOiK09690.
OMAiMAYIVEG.
OrthoDBiPOG091H06FP.

Family and domain databases

InterProiIPR013525. ABC_2_trans.
IPR000412. ABC_2_transport.
[Graphical view]
PANTHERiPTHR30413. PTHR30413. 1 hit.
PfamiPF01061. ABC2_membrane. 1 hit.
[Graphical view]
PIRSFiPIRSF006648. DrrB. 1 hit.
PROSITEiPS51012. ABC_TM2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiE3GCY3_ENTLS
AccessioniPrimary (citable) accession number: E3GCY3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 30, 2016
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.