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E3FVG3 (E3FVG3_STIAD) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Two component transcriptional regulator, Fis type EMBL ADO70989.1
Gene names
Ordered Locus Names:STAUR_3197
OrganismStigmatella aurantiaca (strain DW4/3-1) [Complete proteome] [HAMAP] EMBL ADO70989.1
Taxonomic identifier378806 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Myxococcales › Cystobacterineae › Cystobacteraceae › Stigmatella ›

Protein attributes

Sequence length472 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 sigma-54 factor interaction domain. RuleBase RU000717 SAAS SAAS002078

Sequences

Sequence LengthMass (Da)Tools
E3FVG3 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 3E08CC0EE3DA662A

FASTA47250,997
        10         20         30         40         50         60 
MTTATVLVVD DDRANLDSVA RIFQREGLAT HCASNGTEAL ELLRKPEVSV MVTDLMMPGM 

        70         80         90        100        110        120 
DGQELLKASR TIRPDVEVVL MTAYGTVETA VAAMKDGAYD FITKPLKRHA LVKAVQKALE 

       130        140        150        160        170        180 
KQALVAENKV LKAKLAEMGA SGGKAMVGQA PAFRAMMDTL RQAAPSTATV LLIGESGTGK 

       190        200        210        220        230        240 
ELAARALHEH SSRAKTAFIA VNCAALPESI LEAELFGVER GAYTGAVARR EGRFERAHGG 

       250        260        270        280        290        300 
TLFLDEVGEM PLSAQVKLLR VLQEGEIERL GGTQTVKVDV RLVAATNKDL QKEVAEGRFR 

       310        320        330        340        350        360 
EDLYYRLNVV EVRVPALASR REDIPLLADA FLRRFAAKNG KTVRGFSPEA LQILENYAWP 

       370        380        390        400        410        420 
GNVRELEHAV ERAVVLAKGE SLEAGDLPES VRKGPLGSAG QLVIPIGTPM EEIERRVIHE 

       430        440        450        460        470 
TLRHTKGDKT LAARLLGIAA RTIYRKLERE ASGGPERELS ASDEPGPSGA AD

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References

[1]"Evolution of fruiting body formation in Myxococcales: a comparative genomic analysis."
Huntley S., Hamann N., Wegener-Feldbruegge S., Treuner-Lange A., Kube M., Reinhardt R., Klages S., Mueller R., Ronning C.M., Nierman W.C., Sogaard-Andersen L.
Submitted (OCT-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DW4/3-1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002271 Genomic DNA. Translation: ADO70989.1.
RefSeqYP_003952816.1. NC_014623.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO70989; ADO70989; STAUR_3197.
GeneID9876690.
KEGGsur:STAUR_3197.
PATRIC42685881. VBIStiAur43712203747_3259.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK07713.

Family and domain databases

Gene3D1.10.10.60. 1 hit.
InterProIPR003593. AAA+_ATPase.
IPR011006. CheY-like_superfamily.
IPR009057. Homeodomain-like.
IPR002197. HTH_Fis.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR002078. Sigma_54_int.
IPR025943. Sigma_54_int_dom_ATP-bd_2.
IPR025944. Sigma_54_int_dom_CS.
[Graphical view]
PfamPF02954. HTH_8. 1 hit.
PF00072. Response_reg. 1 hit.
PF00158. Sigma54_activat. 1 hit.
[Graphical view]
PRINTSPR01590. HTHFIS.
SMARTSM00382. AAA. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMSSF52172. CheY_like. 1 hit.
SSF46689. Homeodomain_like. 1 hit.
PROSITEPS50110. RESPONSE_REGULATORY. 1 hit.
PS00676. SIGMA54_INTERACT_2. 1 hit.
PS00688. SIGMA54_INTERACT_3. 1 hit.
PS50045. SIGMA54_INTERACT_4. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3FVG3_STIAD
AccessionPrimary (citable) accession number: E3FVG3
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 1, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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