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Protein
Submitted name:

Alpha-L-arabinofuranosidase B family protein

Gene

STAUR_3988

Organism
Stigmatella aurantiaca (strain DW4/3-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciSAUR378806:GCZI-3988-MONOMER.

Protein family/group databases

CAZyiCBM42. Carbohydrate-Binding Module Family 42.
GH2. Glycoside Hydrolase Family 2.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-L-arabinofuranosidase B family proteinImported
Gene namesi
Ordered Locus Names:STAUR_3988Imported
OrganismiStigmatella aurantiaca (strain DW4/3-1)Imported
Taxonomic identifieri378806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesCystobacterineaeArchangiaceaeStigmatella
Proteomesi
  • UP000001351 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 32Sequence analysisAdd BLAST32
ChainiPRO_500316961133 – 922Sequence analysisAdd BLAST890

Interactioni

Protein-protein interaction databases

STRINGi378806.STAUR_3988.

Structurei

3D structure databases

ProteinModelPortaliE3FL68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini100 – 220Glyco_hydro_2_NInterPro annotationAdd BLAST121
Domaini239 – 316Glyco_hydro_2InterPro annotationAdd BLAST78
Domaini363 – 470Glyco_hydro_2_CInterPro annotationAdd BLAST108
Domaini622 – 756AbfBInterPro annotationAdd BLAST135
Domaini777 – 916AbfBInterPro annotationAdd BLAST140

Sequence similaritiesi

Belongs to the glycosyl hydrolase 2 family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4107QU9. Bacteria.
COG3250. LUCA.
OrthoDBiPOG091H0CDI.

Family and domain databases

Gene3Di2.60.120.260. 1 hit.
2.60.40.10. 1 hit.
InterProiView protein in InterPro
IPR007934. AbfB_ABD.
IPR036195. AbfB_ABD_sf.
IPR036156. Beta-gal/glucu_dom_sf.
IPR008979. Galactose-bd-like_sf.
IPR006103. Glyco_hydro_2_cat.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
PfamiView protein in Pfam
PF05270. AbfB. 2 hits.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
SUPFAMiSSF110221. SSF110221. 2 hits.
SSF49303. SSF49303. 1 hit.
SSF49785. SSF49785. 1 hit.
SSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E3FL68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRALRFAPA GSPSLRLLPL LCGLLSLHGA HAAWAPKPPP LATQWTSQVS
60 70 80 90 100
TTNALPEYPR PQMVRADWQN LNGEWQFGNA TAGQTPPFGQ NLAESILVPF
110 120 130 140 150
PIESGLSGIK RHQDRMWYRR TFTVPAAWSG RRVNLHFGAV DWEATVYVNG
160 170 180 190 200
QRVGTHQGGF DAFSFDITGN LNGGTNELIV GVYDPTDAGT QPVGKQTNNP
210 220 230 240 250
QGIEYTAASG IWQTVWLEPT PSARITRLDM TPDVTGSALR LTVRGTGLAG
260 270 280 290 300
QTVEAVAFDG TTQVGSAVGN VDGEIRIPVP NPKLWSPESP FLYDLRVSLK
310 320 330 340 350
SGTTTVDQVT SYFGMRSVGL KLVGGVLRPV LNGQFVFQIG TLDQGYWPDG
360 370 380 390 400
IYTAPTDAAL KFDIQKHKDL GYNLIRKHIK VEPQRWFYWA DKLGILVWQD
410 420 430 440 450
MPSMDSGKSP TAAARTQFEL EMREMVDEHR SSPSVITWVI QNEGWGQYDQ
460 470 480 490 500
ARLADLVKGW DSTRLVDNMS GINCCNAVDG GNGDLVDWHV YVGPGSPPPS
510 520 530 540 550
ATRAAVVGEF GGLGLKVAGH LWNPNGNFFS YEEVPDSATL TSRYVGLIKS
560 570 580 590 600
IQPLMNRPGL SAAVYTEITD VEGEINGVLT YDRAIVKVDA NQVRTAHLNL
610 620 630 640 650
IAASRQLNTQ GPLPLNQYRS LQVMVPGYTN RYLRHFESLG VTEVVNSASN
660 670 680 690 700
GTLKQDTTFK IVPGLADAAC YSFEPRNFPG SYLRHFNSRV RRDPRDGTAL
710 720 730 740 750
FDQDATFCVR PALDGSPGVS LESKNKPGFY LRHRNSEVWV DAFSDTLGFR
760 770 780 790 800
QDAVWGITVP WWQSNANVPQ GTFQSIQVTT AGYTNRYLRH IDSLGVTAVV
810 820 830 840 850
DGASNATLKQ DATFKLVPGL AESSCYSFES RNYPGQYLRH SNSRIRKDTP
860 870 880 890 900
DGSVIFNQDA TFCAQPGLSG TGVSFESFNF PGRYLRHAVS EVWIAAGIGS
910 920
NWDSPESFSA DATWNVVPPW AP
Length:922
Mass (Da):101,123
Last modified:January 11, 2011 - v1
Checksum:i3663B2EC13EA3CCB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002271 Genomic DNA. Translation: ADO71776.1.
RefSeqiWP_013375993.1. NZ_AAMD01000239.1.

Genome annotation databases

EnsemblBacteriaiADO71776; ADO71776; STAUR_3988.
KEGGisur:STAUR_3988.

Similar proteinsi

Entry informationi

Entry nameiE3FL68_STIAD
AccessioniPrimary (citable) accession number: E3FL68
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 22, 2017
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported