E3F4J6 (E3F4J6_KETVY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Deoxyribose-phosphate aldolase EMBL ADO43412.1

Gene names

Ordered Locus Names:

EIO_2320 EMBL ADO43412.1

Organism

Ketogulonicigenium vulgare (strain Y25) [Complete proteome] [HAMAP]

Taxonomic identifier

880591 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Ketogulonicigenium › Ketogulonicigenium vulgare

Protein attributes

Sequence length	316 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. SAAS SAAS011343
Catalytic activity	2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. SAAS SAAS011343
Pathway	Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. SAAS SAAS011343
Subcellular location	Cytoplasm By similarity SAAS SAAS011343.

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS011343
Ligand	Schiff base SAAS SAAS011343
Molecular function	Lyase SAAS SAAS011343
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	deoxyribonucleotide catabolic process Inferred from electronic annotation. Source: InterPro deoxyribose phosphate catabolic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	deoxyribose-phosphate aldolase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3F4J6 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: 1475C0E0C59297E2	FASTA	316	34,268
	10 20 30 40 50 60 MTSLTRNPGM ALDLDWVLGA RVNTPAITRR CASLPARRSV KKDYQAAWLL KAVSLIDLTT 70 80 90 100 110 120 LSGDDTADRV RRLCAKARQP IAPEVLDRLG MSGLTTGAVC VYHDMIGAAV DALQGSDIPV 130 140 150 160 170 180 AAVSTGFPAG LSPWHLRLQE IRESVAAGAQ EIDIVISRRH VLSGNWQALY DEMLAMREAC 190 200 210 220 230 240 GEAHIKAILA TGELGTLENV ARASLICMMA GADFIKTSTG KEAVNATLPV SLTMIRQIRD 250 260 270 280 290 300 YHDRTGIYVG YKPAGGISKA KDALTYLSLM REELGLRWLQ PDLFRFGASS LLGDIERQLD 310 HYVTGGYSAA YRHALA

References

[1]

"Complete genome sequence of the bacterium Ketogulonicigenium vulgare Y25." Xiong X.H., Han S., Wang J.H., Jiang Z.H., Chen W., Jia N., Wei H.L., Cheng H., Yang Y.X., Zhu B., You S., He J.Y., Hou W., Chen M.X., Yu C.J., Jiao Y.H., Zhang W.C. J. Bacteriol. 193:315-316(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Y25.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002224 Genomic DNA. Translation: ADO43412.1.
RefSeq	YP_003964712.1. NC_014625.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADO43412; ADO43412; EIO_2320.
GeneID	9872943.
KEGG	kvu:EIO_2320.
PATRIC	43496981. VBIKetVul170732_2562.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000241644.
KO	K01619.
Enzyme and pathway databases
BioCyc	KVUL880591:GHQW-2547-MONOMER.
UniPathway	UPA00002; UER00468.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR011343. DeoC. IPR002915. DeoC/FbaB/lacD_aldolase. [Graphical view]
PANTHER	PTHR10889. PTHR10889. 1 hit.
Pfam	PF01791. DeoC. 1 hit. [Graphical view]
PIRSF	PIRSF001357. DeoC. 1 hit.
TIGRFAMs	TIGR00126. deoC. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E3F4J6_KETVY

Accession

Primary (citable) accession number: E3F4J6

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)