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E3F392

- E3F392_KETVY

UniProt

E3F392 - E3F392_KETVY

Protein

Phosphopentomutase

Gene

deoB

Organism
Ketogulonicigenium vulgare (strain Y25)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 28 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    Phosphotransfer between the C1 and C5 carbon atoms of pentose.UniRule annotationSAAS annotation

    Catalytic activityi

    2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-alpha-D-ribose 5-phosphate.UniRule annotationSAAS annotation
    Alpha-D-ribose 1-phosphate = D-ribose 5-phosphate.UniRule annotationSAAS annotation

    Cofactori

    Binds 1 or 2 manganese ions.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi10 – 101ManganeseUniRule annotation
    Metal bindingi298 – 2981ManganeseUniRule annotation
    Metal bindingi334 – 3341ManganeseUniRule annotation
    Metal bindingi335 – 3351ManganeseUniRule annotation
    Metal bindingi346 – 3461ManganeseUniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. manganese ion binding Source: UniProtKB-HAMAP
    3. phosphopentomutase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. 5-phosphoribose 1-diphosphate biosynthetic process Source: UniProtKB-UniPathway
    2. cellular metabolic compound salvage Source: InterPro
    3. deoxyribonucleotide catabolic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Ligandi

    ManganeseUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciKVUL880591:GHQW-2167-MONOMER.
    UniPathwayiUPA00087; UER00173.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    PhosphopentomutaseUniRule annotation (EC:5.4.2.7UniRule annotation)
    Alternative name(s):
    PhosphodeoxyribomutaseUniRule annotation
    Gene namesi
    Name:deoBUniRule annotation
    Ordered Locus Names:EIO_2167Imported
    OrganismiKetogulonicigenium vulgare (strain Y25)Imported
    Taxonomic identifieri880591 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeKetogulonicigenium
    ProteomesiUP000006871: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE3F392.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the phosphopentomutase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000008159.
    KOiK01839.
    OMAiDHTREAL.

    Family and domain databases

    Gene3Di3.30.70.1250. 1 hit.
    3.40.720.10. 2 hits.
    HAMAPiMF_00740. Phosphopentomut.
    InterProiIPR017849. Alkaline_Pase-like_a/b/a.
    IPR017850. Alkaline_phosphatase_core.
    IPR010045. DeoB.
    IPR006124. Metalloenzyme.
    IPR024052. Phosphopentomutase_DeoB_cap.
    [Graphical view]
    PfamiPF01676. Metalloenzyme. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001491. Ppentomutase. 1 hit.
    SUPFAMiSSF143856. SSF143856. 1 hit.
    SSF53649. SSF53649. 2 hits.
    TIGRFAMsiTIGR01696. deoB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E3F392-1 [UniParc]FASTAAdd to Basket

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    MPRAFLLVMD SAGIGGAPDA GQFFNGAVPD TGANTIGHIA QTRGLQVPVM    50
    ASLGLGAAIK AASGLLVDLP PPTLGAYGAA TEISPGKDTP SGHWEMAGVP 100
    VPWSWTYFPD IVPAFPGAVT ARICELAGTA GILGNCHASG TQVIDDLAEE 150
    HIRTGWPICY TSADSVLQIA AHEAHFGRAR LIDICAALAP MLHAMRVGRV 200
    IARPFIGDAA QGWQRTPYRR DFAIAPPAPT ILDRAKDAGH PVHAIGKIGD 250
    IFSMRGIDDC AKGRDADLMQ ALQARVADAA DGALVFANFV EFDTDYGHRR 300
    DVEGYARHLE WFDAALGRVI AALRPDDLLI VTADHGNDPT WVGSDHTRER 350
    VPVLVHGAGV RDLGPLAFVD MAASIAAHLG LPPNGIGRSF L 391
    Length:391
    Mass (Da):41,178
    Last modified:January 11, 2011 - v1
    Checksum:iD116370C7EAA2D1D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002224 Genomic DNA. Translation: ADO43269.1.
    RefSeqiWP_013384919.1. NC_014625.1.
    YP_003964569.1. NC_014625.1.

    Genome annotation databases

    EnsemblBacteriaiADO43269; ADO43269; EIO_2167.
    GeneIDi9872790.
    KEGGikvu:EIO_2167.
    PATRICi43496663. VBIKetVul170732_2407.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002224 Genomic DNA. Translation: ADO43269.1 .
    RefSeqi WP_013384919.1. NC_014625.1.
    YP_003964569.1. NC_014625.1.

    3D structure databases

    ProteinModelPortali E3F392.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO43269 ; ADO43269 ; EIO_2167 .
    GeneIDi 9872790.
    KEGGi kvu:EIO_2167.
    PATRICi 43496663. VBIKetVul170732_2407.

    Phylogenomic databases

    HOGENOMi HOG000008159.
    KOi K01839.
    OMAi DHTREAL.

    Enzyme and pathway databases

    UniPathwayi UPA00087 ; UER00173 .
    BioCyci KVUL880591:GHQW-2167-MONOMER.

    Family and domain databases

    Gene3Di 3.30.70.1250. 1 hit.
    3.40.720.10. 2 hits.
    HAMAPi MF_00740. Phosphopentomut.
    InterProi IPR017849. Alkaline_Pase-like_a/b/a.
    IPR017850. Alkaline_phosphatase_core.
    IPR010045. DeoB.
    IPR006124. Metalloenzyme.
    IPR024052. Phosphopentomutase_DeoB_cap.
    [Graphical view ]
    Pfami PF01676. Metalloenzyme. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001491. Ppentomutase. 1 hit.
    SUPFAMi SSF143856. SSF143856. 1 hit.
    SSF53649. SSF53649. 2 hits.
    TIGRFAMsi TIGR01696. deoB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Y25Imported.

    Entry informationi

    Entry nameiE3F392_KETVY
    AccessioniPrimary (citable) accession number: E3F392
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 28 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3