Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E3F210

- E3F210_KETVY

UniProt

E3F210 - E3F210_KETVY

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Ketogulonicigenium vulgare (strain Y25)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei47 – 471NucleophileUniRule annotation

GO - Molecular functioni

  1. pseudouridine synthase activity Source: UniProtKB-HAMAP
  2. RNA binding Source: InterPro

GO - Biological processi

  1. tRNA pseudouridine synthesis Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

tRNA processingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciKVUL880591:GHQW-2844-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthaseUniRule annotation
tRNA pseudouridylate synthaseUniRule annotation
tRNA-uridine isomeraseUniRule annotation
Gene namesi
Name:truBUniRule annotationImported
Ordered Locus Names:EIO_2845Imported
OrganismiKetogulonicigenium vulgare (strain Y25)Imported
Taxonomic identifieri880591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeKetogulonicigenium
ProteomesiUP000006871: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3F210.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000231225.
KOiK03177.
OMAiNGNPGMV.

Family and domain databases

HAMAPiMF_01080. TruB_bact.
InterProiIPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view]
PANTHERiPTHR13767. PTHR13767. 1 hit.
PfamiPF01509. TruB_N. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00431. TruB. 1 hit.

Sequencei

Sequence statusi: Complete.

E3F210-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARGRKGRNI SGWVIVDKPA GITSTAVVNK IRWAFDAQKA GHAGTLDPDA
60 70 80 90 100
TGLLAVALGE ATKTIPYVTD ALKAYEFTVT FGASTSTDDA SGEVVATSDA
110 120 130 140 150
RPTDAAIKEA LNAFVGDIMQ VPPAFSAIKI DGERAYDLAR EGQEFEIAAR
160 170 180 190 200
PLFVESLLLV DRLDADHAVL EMTCGKGGYV RSIARDLGAA LGCYGHVLKL
210 220 230 240 250
RRIWSSSFTL KGAVTMEQVE SLARTPALDD LLQPLEVALA DLPMVTCPEA
260 270 280 290 300
SLTRFRNGNP ALVFPAPGLE FGDEAWVSVD GRALAIGQYR GSELHPARVI

VGV
Length:303
Mass (Da):32,199
Last modified:January 11, 2011 - v1
Checksum:iE1BF7797674AC07E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002224 Genomic DNA. Translation: ADO43916.1.
RefSeqiWP_013385564.1. NC_014625.1.
YP_003965216.1. NC_014625.1.

Genome annotation databases

EnsemblBacteriaiADO43916; ADO43916; EIO_2845.
GeneIDi9873467.
KEGGikvu:EIO_2845.
PATRICi43498053. VBIKetVul170732_3089.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002224 Genomic DNA. Translation: ADO43916.1 .
RefSeqi WP_013385564.1. NC_014625.1.
YP_003965216.1. NC_014625.1.

3D structure databases

ProteinModelPortali E3F210.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO43916 ; ADO43916 ; EIO_2845 .
GeneIDi 9873467.
KEGGi kvu:EIO_2845.
PATRICi 43498053. VBIKetVul170732_3089.

Phylogenomic databases

HOGENOMi HOG000231225.
KOi K03177.
OMAi NGNPGMV.

Enzyme and pathway databases

BioCyci KVUL880591:GHQW-2844-MONOMER.

Family and domain databases

HAMAPi MF_01080. TruB_bact.
InterProi IPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view ]
PANTHERi PTHR13767. PTHR13767. 1 hit.
Pfami PF01509. TruB_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00431. TruB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y25Imported.

Entry informationi

Entry nameiE3F210_KETVY
AccessioniPrimary (citable) accession number: E3F210
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 29, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3