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E3F210

- E3F210_KETVY

UniProt

E3F210 - E3F210_KETVY

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Protein

tRNA pseudouridine synthase B

Gene
truB, EIO_2845
Organism
Ketogulonicigenium vulgare (strain Y25)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs By similarity.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei47 – 471Nucleophile By similarityUniRule annotation

GO - Molecular functioni

  1. pseudouridine synthase activity Source: UniProtKB-HAMAP
  2. RNA binding Source: InterPro

GO - Biological processi

  1. tRNA pseudouridine synthesis Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotations

Keywords - Biological processi

tRNA processingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciKVUL880591:GHQW-2844-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthase
tRNA pseudouridylate synthase
tRNA-uridine isomerase
Gene namesi
Name:truBUniRule annotationImported
Ordered Locus Names:EIO_2845Imported
OrganismiKetogulonicigenium vulgare (strain Y25)Imported
Taxonomic identifieri880591 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaeKetogulonicigenium
ProteomesiUP000006871: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3F210.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000231225.
KOiK03177.
OMAiNGNPGMV.

Family and domain databases

HAMAPiMF_01080. TruB_bact.
InterProiIPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view]
PANTHERiPTHR13767. PTHR13767. 1 hit.
PfamiPF01509. TruB_N. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00431. TruB. 1 hit.

Sequencei

Sequence statusi: Complete.

E3F210-1 [UniParc]FASTAAdd to Basket

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MARGRKGRNI SGWVIVDKPA GITSTAVVNK IRWAFDAQKA GHAGTLDPDA    50
TGLLAVALGE ATKTIPYVTD ALKAYEFTVT FGASTSTDDA SGEVVATSDA 100
RPTDAAIKEA LNAFVGDIMQ VPPAFSAIKI DGERAYDLAR EGQEFEIAAR 150
PLFVESLLLV DRLDADHAVL EMTCGKGGYV RSIARDLGAA LGCYGHVLKL 200
RRIWSSSFTL KGAVTMEQVE SLARTPALDD LLQPLEVALA DLPMVTCPEA 250
SLTRFRNGNP ALVFPAPGLE FGDEAWVSVD GRALAIGQYR GSELHPARVI 300
VGV 303
Length:303
Mass (Da):32,199
Last modified:January 11, 2011 - v1
Checksum:iE1BF7797674AC07E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002224 Genomic DNA. Translation: ADO43916.1.
RefSeqiYP_003965216.1. NC_014625.1.

Genome annotation databases

EnsemblBacteriaiADO43916; ADO43916; EIO_2845.
GeneIDi9873467.
KEGGikvu:EIO_2845.
PATRICi43498053. VBIKetVul170732_3089.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002224 Genomic DNA. Translation: ADO43916.1 .
RefSeqi YP_003965216.1. NC_014625.1.

3D structure databases

ProteinModelPortali E3F210.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO43916 ; ADO43916 ; EIO_2845 .
GeneIDi 9873467.
KEGGi kvu:EIO_2845.
PATRICi 43498053. VBIKetVul170732_3089.

Phylogenomic databases

HOGENOMi HOG000231225.
KOi K03177.
OMAi NGNPGMV.

Enzyme and pathway databases

BioCyci KVUL880591:GHQW-2844-MONOMER.

Family and domain databases

HAMAPi MF_01080. TruB_bact.
InterProi IPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view ]
PANTHERi PTHR13767. PTHR13767. 1 hit.
Pfami PF01509. TruB_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00431. TruB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Y25Imported.

Entry informationi

Entry nameiE3F210_KETVY
AccessioniPrimary (citable) accession number: E3F210
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 11, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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