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Protein
Submitted name:

Sialidase

Gene

BBIF_1734

Organism
Bifidobacterium bifidum (strain S17)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Names & Taxonomyi

Protein namesi
Submitted name:
SialidaseImported
Gene namesi
Ordered Locus Names:BBIF_1734Imported
OrganismiBifidobacterium bifidum (strain S17)Imported
Taxonomic identifieri883062 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaBifidobacterialesBifidobacteriaceaeBifidobacterium
Proteomesi
  • UP000006869 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei811 – 830HelicalSequence analysisAdd BLAST20

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 35Sequence analysisAdd BLAST35
ChainiPRO_500316942036 – 836Sequence analysisAdd BLAST801

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini235 – 517SialidasesInterPro annotationAdd BLAST283
Domaini573 – 635NPCBM_assocInterPro annotationAdd BLAST63

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

HOGENOMiHOG000166245.
KOiK01186.
OMAiANNEGRA.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
PF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

E3ERD5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRSTKPSLL RRLGALVAAA AMLVVLPAGV STASAASDDA DMLTVTMTRT
60 70 80 90 100
DTLGDEVYVG DTLTYSFTNT NNTSSAFTAF PAESNLSGVL TTGTPNCRYE
110 120 130 140 150
NLAGGASYPC STASHTITAD DLTAGSFTPR TVWKATSDRG GTQVLQDNIV
160 170 180 190 200
STGDTVTVKE GKRPDPATIP TDRADGEAVR LATARQNLGT ECYRIPALAE
210 220 230 240 250
APNGWILAAF DQRPNTAMAN GSGVKCWDAP QPNSIVQRIS KDGGKSWTPI
260 270 280 290 300
QYVAQGKNAP ERYGYSDPSY VVDEETGEIF LFFVHSYNKG FADSQLGVDE
310 320 330 340 350
SNRNVLHAVV VSSKDNGETW SKPRDITADI TKGYENEWKS RFATSGAGIQ
360 370 380 390 400
LKYGKYKGRL IQQYAVGRTT GSNAAVSVYS DDHGKTWQAG NPVTGMLMDE
410 420 430 440 450
NKVVELSDGH VMLNSRPGNG SGYRRVAISE DGGVNYGTVK NETQLPDPNN
460 470 480 490 500
NAHITRAFPN APEGSAKAKV LLYSSPRANN EGRANGVVRI SLDDGTTWSS
510 520 530 540 550
GKLYKAGSMA YSVITALSGA AGGGYGLLYE GAWVTGGGID SHDIMYTHIS
560 570 580 590 600
MDWLGYLSAT ADDVTASVEE GASTVDVTVP VSNVGSVDYT GVTVTPADLP
610 620 630 640 650
TGWSASPVNV GALASGASKD VTVTVNVPAT AKKDDVAKIV LRVTGTSAAN
660 670 680 690 700
ADATTGFDGS ITVNVTEKSE PDPEPEPTIT GVSAVTSQAG VKVGDVFDAS
710 720 730 740 750
KVSVTAAMSD GSSKALAAGE YSLSAVDADG KAVDLAEPFA AAGVVTVTVS
760 770 780 790 800
VPVEGADPLT ASFTIDVAEK SADPEPKPEP EPKPEPEKPA GPKVDVPTEK
810 820 830
PGLSKTGAST AGMSIVFVLL ALSGVAALSL RRRSVH
Length:836
Mass (Da):86,980
Last modified:January 11, 2011 - v1
Checksum:iDB3DC7C1DE6456B9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO53939.1.
RefSeqiWP_013364025.1. NC_014616.1.

Genome annotation databases

EnsemblBacteriaiADO53939; ADO53939; BBIF_1734.
KEGGibbi:BBIF_1734.
PATRICi42481064. VBIBifBif172477_1797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO53939.1.
RefSeqiWP_013364025.1. NC_014616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH33. Glycoside Hydrolase Family 33.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO53939; ADO53939; BBIF_1734.
KEGGibbi:BBIF_1734.
PATRICi42481064. VBIBifBif172477_1797.

Phylogenomic databases

HOGENOMiHOG000166245.
KOiK01186.
OMAiANNEGRA.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF13088. BNR_2. 1 hit.
PF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMiSSF50939. SSF50939. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE3ERD5_BIFBS
AccessioniPrimary (citable) accession number: E3ERD5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 2, 2016
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.