E3ERD5 (E3ERD5_BIFBS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sialidase EMBL ADO53939.1

Gene names

Ordered Locus Names:

BBIF_1734 EMBL ADO53939.1

Organism

Bifidobacterium bifidum (strain S17) [Complete proteome] [HAMAP]

Taxonomic identifier

883062 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Bifidobacteriales › Bifidobacteriaceae › Bifidobacterium › Bifidobacterium bifidum

Protein attributes

Sequence length	836 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	E3ERD5 [UniParc]. Last modified January 11, 2011. Version 1. Checksum: DB3DC7C1DE6456B9	FASTA	836	86,980
	10 20 30 40 50 60 MVRSTKPSLL RRLGALVAAA AMLVVLPAGV STASAASDDA DMLTVTMTRT DTLGDEVYVG 70 80 90 100 110 120 DTLTYSFTNT NNTSSAFTAF PAESNLSGVL TTGTPNCRYE NLAGGASYPC STASHTITAD 130 140 150 160 170 180 DLTAGSFTPR TVWKATSDRG GTQVLQDNIV STGDTVTVKE GKRPDPATIP TDRADGEAVR 190 200 210 220 230 240 LATARQNLGT ECYRIPALAE APNGWILAAF DQRPNTAMAN GSGVKCWDAP QPNSIVQRIS 250 260 270 280 290 300 KDGGKSWTPI QYVAQGKNAP ERYGYSDPSY VVDEETGEIF LFFVHSYNKG FADSQLGVDE 310 320 330 340 350 360 SNRNVLHAVV VSSKDNGETW SKPRDITADI TKGYENEWKS RFATSGAGIQ LKYGKYKGRL 370 380 390 400 410 420 IQQYAVGRTT GSNAAVSVYS DDHGKTWQAG NPVTGMLMDE NKVVELSDGH VMLNSRPGNG 430 440 450 460 470 480 SGYRRVAISE DGGVNYGTVK NETQLPDPNN NAHITRAFPN APEGSAKAKV LLYSSPRANN 490 500 510 520 530 540 EGRANGVVRI SLDDGTTWSS GKLYKAGSMA YSVITALSGA AGGGYGLLYE GAWVTGGGID 550 560 570 580 590 600 SHDIMYTHIS MDWLGYLSAT ADDVTASVEE GASTVDVTVP VSNVGSVDYT GVTVTPADLP 610 620 630 640 650 660 TGWSASPVNV GALASGASKD VTVTVNVPAT AKKDDVAKIV LRVTGTSAAN ADATTGFDGS 670 680 690 700 710 720 ITVNVTEKSE PDPEPEPTIT GVSAVTSQAG VKVGDVFDAS KVSVTAAMSD GSSKALAAGE 730 740 750 760 770 780 YSLSAVDADG KAVDLAEPFA AAGVVTVTVS VPVEGADPLT ASFTIDVAEK SADPEPKPEP 790 800 810 820 830 EPKPEPEKPA GPKVDVPTEK PGLSKTGAST AGMSIVFVLL ALSGVAALSL RRRSVH

References

[1]

"Complete genome sequence of Bifidobacterium bifidum S17." Zhurina D., Zomer A., Gleinser M., Brancaccio V.F., Auchter M., Waidmann M.S., Westermann C., van Sinderen D., Riedel C.U. J. Bacteriol. 193:301-302(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S17.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP002220 Genomic DNA. Translation: ADO53939.1.
RefSeq	YP_003939513.1. NC_014616.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ADO53939; ADO53939; BBIF_1734.
GeneID	9847978.
KEGG	bbi:BBIF_1734.
PATRIC	42481064. VBIBifBif172477_1797.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000166245.
KO	K01186.
Enzyme and pathway databases
BioCyc	BBIF883062:GH1R-1735-MONOMER.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR018905. A-galactase_NEW3. IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit.
Pfam	PF10633. NPCBM_assoc. 1 hit. [Graphical view]
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

E3ERD5_BIFBS

Accession

Primary (citable) accession number: E3ERD5

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)