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E3ERD5 (E3ERD5_BIFBS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BBIF_1734 EMBL ADO53939.1
OrganismBifidobacterium bifidum (strain S17) [Complete proteome] [HAMAP] EMBL ADO53939.1
Taxonomic identifier883062 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length836 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E3ERD5 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: DB3DC7C1DE6456B9

FASTA83686,980
        10         20         30         40         50         60 
MVRSTKPSLL RRLGALVAAA AMLVVLPAGV STASAASDDA DMLTVTMTRT DTLGDEVYVG 

        70         80         90        100        110        120 
DTLTYSFTNT NNTSSAFTAF PAESNLSGVL TTGTPNCRYE NLAGGASYPC STASHTITAD 

       130        140        150        160        170        180 
DLTAGSFTPR TVWKATSDRG GTQVLQDNIV STGDTVTVKE GKRPDPATIP TDRADGEAVR 

       190        200        210        220        230        240 
LATARQNLGT ECYRIPALAE APNGWILAAF DQRPNTAMAN GSGVKCWDAP QPNSIVQRIS 

       250        260        270        280        290        300 
KDGGKSWTPI QYVAQGKNAP ERYGYSDPSY VVDEETGEIF LFFVHSYNKG FADSQLGVDE 

       310        320        330        340        350        360 
SNRNVLHAVV VSSKDNGETW SKPRDITADI TKGYENEWKS RFATSGAGIQ LKYGKYKGRL 

       370        380        390        400        410        420 
IQQYAVGRTT GSNAAVSVYS DDHGKTWQAG NPVTGMLMDE NKVVELSDGH VMLNSRPGNG 

       430        440        450        460        470        480 
SGYRRVAISE DGGVNYGTVK NETQLPDPNN NAHITRAFPN APEGSAKAKV LLYSSPRANN 

       490        500        510        520        530        540 
EGRANGVVRI SLDDGTTWSS GKLYKAGSMA YSVITALSGA AGGGYGLLYE GAWVTGGGID 

       550        560        570        580        590        600 
SHDIMYTHIS MDWLGYLSAT ADDVTASVEE GASTVDVTVP VSNVGSVDYT GVTVTPADLP 

       610        620        630        640        650        660 
TGWSASPVNV GALASGASKD VTVTVNVPAT AKKDDVAKIV LRVTGTSAAN ADATTGFDGS 

       670        680        690        700        710        720 
ITVNVTEKSE PDPEPEPTIT GVSAVTSQAG VKVGDVFDAS KVSVTAAMSD GSSKALAAGE 

       730        740        750        760        770        780 
YSLSAVDADG KAVDLAEPFA AAGVVTVTVS VPVEGADPLT ASFTIDVAEK SADPEPKPEP 

       790        800        810        820        830 
EPKPEPEKPA GPKVDVPTEK PGLSKTGAST AGMSIVFVLL ALSGVAALSL RRRSVH 

« Hide

References

[1]"Complete genome sequence of Bifidobacterium bifidum S17."
Zhurina D., Zomer A., Gleinser M., Brancaccio V.F., Auchter M., Waidmann M.S., Westermann C., van Sinderen D., Riedel C.U.
J. Bacteriol. 193:301-302(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S17 EMBL ADO53939.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002220 Genomic DNA. Translation: ADO53939.1.
RefSeqYP_003939513.1. NC_014616.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO53939; ADO53939; BBIF_1734.
GeneID9847978.
KEGGbbi:BBIF_1734.
PATRIC42481064. VBIBifBif172477_1797.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000166245.
KOK01186.

Enzyme and pathway databases

BioCycBBIF883062:GH1R-1789-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR018905. A-galactase_NEW3.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3ERD5_BIFBS
AccessionPrimary (citable) accession number: E3ERD5
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 16, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)