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E3ERD4 (E3ERD4_BIFBS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:BBIF_1733 EMBL ADO53938.1
OrganismBifidobacterium bifidum (strain S17) [Complete proteome] [HAMAP] EMBL ADO53938.1
Taxonomic identifier883062 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium

Protein attributes

Sequence length1795 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E3ERD4 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 8D39C8256FB82632

FASTA1,795189,122
        10         20         30         40         50         60 
MTTIFRRATA KTLMRKLSGL LVAIAMLAVL PAGTISANAA DEPPQEYLQL TLTRTDSNGT 

        70         80         90        100        110        120 
PAEVGDKLTY SLGYKNVSDT GFIVHPTASN LNNVATPQSA SNPNPMCRWG NLAAGASAAC 

       130        140        150        160        170        180 
TWSASKEFAY HVVTEDDVAN GFTPTATVSA TTQDGTNGVL QSVDITGETV PAVPATSTLR 

       190        200        210        220        230        240 
VAMQRTDTLG DNVKIGDRLT FNFTYTNKTA QKIYAYPSES NIERVDVVSF PRNSCRSGVE 

       250        260        270        280        290        300 
ANQTASCGFA YHVITAEDVV ARRYTPTATF RATSDRDGTQ VLQDDMTFTT GTVTVAGPAD 

       310        320        330        340        350        360 
DAASTPTERK DGEPLLLATN KQIGNTDYYR IPAIAQAPNG WILAAWDLRP KLAADAPNPN 

       370        380        390        400        410        420 
SIVQRISKDG GKSWETLAYV AQGRSATNKY GYSDPSYVVD EEAGKIFLFC VKSYDQGYFG 

       430        440        450        460        470        480 
SVLGVEDARN VLQAVVMESD DNGATWSEPR NITKDITKGH EDEWKSRFAS SGHGIQLKYG 

       490        500        510        520        530        540 
QYKGRLIQQY AVRTTSNTNI AVSVYSDDHG KTWKAGNPVT EVNMDENKVV ELSDGRVMLN 

       550        560        570        580        590        600 
SRPGAAGYRR VAISEDGGVN YGPIKSETQL PDPNNNAQIT RAFPNAPEGS AKAKVLLYSA 

       610        620        630        640        650        660 
PRASNEGRAN GVVRVSFDDG TTWSAGKLFK AGSMAYSVIT ALNDAAGGGY GLLYEGESIT 

       670        680        690        700        710        720 
YTRASMEWLG YLTATASGTA AVKEGEGTLT APVTVTNDGL TDYTNVTVTP TGLPSGWSAE 

       730        740        750        760        770        780 
AVNVGNLAAG QSATVNVPVT VPAAAVSGTV AKATMKITGK YAQSEDTLHS FAEGELAVTV 

       790        800        810        820        830        840 
TDPDPAAKRL KLTIERTDDN GDPVKVGDTL TYRITYENVG TQSFAVYPRE SNLDGVTTPQ 

       850        860        870        880        890        900 
SASNPAPVCR WSRLAPGATG ACVSGNGKQL AYHTVTEADA TAGSFTPSAT IDATADASGE 

       910        920        930        940        950        960 
TVLESVSITG DPVTVSQPVE LPADIAAWKT RNEALADWQT LSEKLAKTDR INWLFTGDSI 

       970        980        990       1000       1010       1020 
THGVQFTRGY RTYSELFANH LDTASVRGVS RANDVVMNTG ISSADASWPL KDGAFEKWVS 

      1030       1040       1050       1060       1070       1080 
DKHPDVVFLT FGMNDGRTGQ AFTVDQYTAN LSTLIDKIRD LGAIPVLQTQ NYTTNTTFNA 

      1090       1100       1110       1120       1130       1140 
NLDTYFDAER RLALDKNVLL VDFNKQWLEL GGGNRESGTY MGAGNDIHPG ENGHIEWAKF 

      1150       1160       1170       1180       1190       1200 
TLGALNMIAN DDPLARWSSS DTTLDKPTVT VDADGNGLKG SDGLEPAPAA AKSVGKFLSG 

      1210       1220       1230       1240       1250       1260 
AQYVDLGGDV VSAVAGKRES NVTIRFRASA TGQPQTLFSL GDSDSATRAT VRLSATGLVQ 

      1270       1280       1290       1300       1310       1320 
FLNSGNTGDF YTVGTNDLAD GAWHTVSVNF VANGFTIYVD GAAMRAISGG AGTQLNVPGA 

      1330       1340       1350       1360       1370       1380 
ITVNTATAGA IRGADSAGGA QQLTGIVDYV AAWSRTLTDA EAKRISAETS AVAVTKVDAA 

      1390       1400       1410       1420       1430       1440 
VNALQPIISD TGARKNIVFV GGETIEGGYT DHLIAKNIVQ LLDERVRWEY VTGLSATDRE 

      1450       1460       1470       1480       1490       1500 
RQRAKFFVAA GQGGLTAKQM DEDYAAMVGE YSPDILFLAP DLYDADGNLA ESAAAAFAGH 

      1510       1520       1530       1540       1550       1560 
IRSVAAKAKE AGAKVVLVTP VTVRGGEDEY AGAMRTVAKE DDLPLIDAQA WIGKVVAADA 

      1570       1580       1590       1600       1610       1620 
SVKTAWFNKA GQLNYAGHLG YARFMMRSLD LYPSNVSGSR IASLPYDTAN VTLVGASENG 

      1630       1640       1650       1660       1670       1680 
GELPVGRVEG TDRAHIDTMQ IGAAASLVVV DSYAVYEIGE DGGRTLVADG LKPADVLADG 

      1690       1700       1710       1720       1730       1740 
IDVTVNDTAA HRYEVVGSAN VPEGADAVTV TYTATLAAVE EPEPGPDPDP TPDPSEKPDG 

      1750       1760       1770       1780       1790 
DGTGDGTGAG TGDVQKPTPD AVAKTGADVF GLLTAVAALL AAGGVTLSLR RRANR 

« Hide

References

[1]"Complete genome sequence of Bifidobacterium bifidum S17."
Zhurina D., Zomer A., Gleinser M., Brancaccio V.F., Auchter M., Waidmann M.S., Westermann C., van Sinderen D., Riedel C.U.
J. Bacteriol. 193:301-302(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S17 EMBL ADO53938.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002220 Genomic DNA. Translation: ADO53938.1.
RefSeqYP_003939512.1. NC_014616.1.

3D structure databases

ProteinModelPortalE3ERD4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO53938; ADO53938; BBIF_1733.
GeneID9847977.
KEGGbbi:BBIF_1733.
PATRIC42481062. VBIBifBif172477_1796.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000166244.
KOK01186.

Enzyme and pathway databases

BioCycBBIF883062:GH1R-1788-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
2.60.120.200. 1 hit.
2.60.40.10. 1 hit.
3.40.50.1110. 2 hits.
InterProIPR018905. A-galactase_NEW3.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR013783. Ig-like_fold.
IPR001791. Laminin_G.
IPR013831. SGNH_hydro-type_esterase_dom.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF10633. NPCBM_assoc. 1 hit.
[Graphical view]
SMARTSM00282. LamG. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameE3ERD4_BIFBS
AccessionPrimary (citable) accession number: E3ERD4
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)