Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Beta-galactosidase BbgIII

Gene

BBIF_0507

Organism
Bifidobacterium bifidum (strain S17)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. cell adhesion Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseSAAS annotation, Hydrolase

Enzyme and pathway databases

BioCyciBBIF883062:GH1R-526-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Beta-galactosidase BbgIIIImported
Gene namesi
Ordered Locus Names:BBIF_0507Imported
OrganismiBifidobacterium bifidum (strain S17)Imported
Taxonomic identifieri883062 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006869: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000158372.
KOiK01190.
OMAiFYQSQWN.

Family and domain databases

Gene3Di2.60.120.260. 3 hits.
2.60.40.320. 1 hit.
2.60.40.920. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003344. Big_1.
IPR011081. Big_4.
IPR000421. Coagulation_fac_5/8-C_type_dom.
IPR011490. FIVAR_dom.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR008964. Invasin/intimin_cell_adhesion.
[Graphical view]
PfamiPF07532. Big_4. 2 hits.
PF00754. F5_F8_type_C. 2 hits.
PF07554. FIVAR. 3 hits.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50022. FA58C_3. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3EMP5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAVRRLGGRI VAFAATVALS IPLGLLTNSA WAVEDATRSD STTQMSSTPE
60 70 80 90 100
VVYSSAVDSK QNRTSDFDAN WKFMLSDSVQ AQDPAFDDSA WQQVDLPHDY
110 120 130 140 150
SITQKYSQSN EAESAYLPGG TGWYRKSFTI DRDLAGKRIA INFDGVYMNA
160 170 180 190 200
TVWFNGVKLG THPYGYSPFS FDLTGNAKFG EENTIVVKVE NRLPSSRWYS
210 220 230 240 250
GSGIYRDVTL TVTDGVHVGN NGVAIKTPSL ATQNGGNVTM NLTTKVANDT
260 270 280 290 300
KAAANITLKQ TVFPKGGKTD AAIGTVTTAS KSIAAGASAD VTSTITAASP
310 320 330 340 350
KLWSIKNPNL YTVRTEVLNG GKVLDTYDTE YGFRWTGFDA TSGFSLNGEK
360 370 380 390 400
VKLKGVSMHH DQGSLGAVAN RRAIERQVEI LQKMGVNSIR TTHNPAAKAL
410 420 430 440 450
IDVCNEKGVL VVEEVFDMWN RSKNGNTEDY GKWFGQAIAG DNAVLGGDKD
460 470 480 490 500
ETWAKFDLTS TINRDRNAPS VIMWSLGNEM MEGISGSVSG FPATSAKLVA
510 520 530 540 550
WTKAADSTRP MTYGDNKIKA NWNESNTMGD NLTANGGVVG TNYSNGANYD
560 570 580 590 600
KIRTDHPSWA IYGSETASAI NSRGIYNRTT GGAQSSDKQL TSYDNSAVGW
610 620 630 640 650
GAVASSAWYD VVQRDFVAGT YVWTGFDYLG EPTPWNGTVS GAVGSWPSPK
660 670 680 690 700
NSYFGIVDTA GFPKDTYYFY QSQWNDDVHT LHILPAWNEN VVAKGSGNNV
710 720 730 740 750
PVVVYTDAAK VKLYFTPKGS TEKRLIGEKS FTKKTTAAGY TYQVYEGTDK
760 770 780 790 800
DSTAHKNMYL TWNVPWAEGT ISAEAYDENN RLIPEGSTEG NASVTTTGKA
810 820 830 840 850
AKLKADADRK TITADGKDLS YIEVDVTDAN GHIVPDAANR VTFDVKGAGK
860 870 880 890 900
LVGVDNGSSP DHDSYQADNR KAFSGKVLAI VQSTKEAGEI TVTAKADGLQ
910 920 930 940 950
SSTVKIATTA VPGTSTEKTV RSFYYSRNYY VKTGNKPILP SDVEVRYSDG
960 970 980 990 1000
TSDRQNVTWD AVSDDQIAKA GSFSVAGTVA GQKISVRVTM IDEIGALLNY
1010 1020 1030 1040 1050
SASTPVGTPA VLPGSRPAVL PDGTVTSANF AVHWTKPADT VYNTAGTVKV
1060 1070 1080 1090 1100
PGTATVFGKE FKVTATIRVQ RSQVTIGSSV SGNALRLTQN IPADKQSDTL
1110 1120 1130 1140 1150
DAIKDGSTTV DANTGGGANP SAWTNWAYSK AGHNTAEITF EYATEQQLGQ
1160 1170 1180 1190 1200
IVMYFFRDSN AVRFPDAGKT KIQISADGKN WTDLAATETI AAQESSDRVK
1210 1220 1230 1240 1250
PYTYDFAPVG ATFVKVTVTN ADTTTPSGVV CAGLTEIELK TATSKFVTNT
1260 1270 1280 1290 1300
SAALSSLTVN GTKVSDSVLA AGSYNTPAII ADVKAEGEGN ASVTVLPAHD
1310 1320 1330 1340 1350
NVIRVITESE DHVTRKTFTI NLGTEQEFPA DSDERDYPAA DMTVTVGSEQ
1360 1370 1380 1390 1400
TSGTATEGPK KFAVDGNTST YWHSNWTPTT VNDLWIAFEL QKPTKLDALR
1410 1420 1430 1440 1450
YLPRPAGSKN GSVTEYKVQV SDDGTNWTDA GSGTWTTDYG WKLAEFNQPV
1460 1470 1480 1490 1500
TTKHVRLKAV HTYADSGNDK FMSASEIRLR KAVDTTDISG ATVTVPAKLT
1510 1520 1530 1540 1550
VDRVDADHPA TFATKDVTVT LGDATLRYGV DYLLDYAGNT AVGKATVTVR
1560 1570 1580 1590 1600
GIDKYSGTVA KTFTIELKNA PAPEPTLTSV SVKTKPSKLT YVVGDAFDPA
1610 1620 1630 1640 1650
GLVLQLNYDD DSTGTVTWNT QTAGDFTFKP ALDAKLKVTD KTVTVTYQGK
1660 1670 1680 1690 1700
SAVIDITVSQ PAPTVSKTDL DKAIKAIEAK NPDSSKYTAD SWKTFADAMA
1710 1720 1730 1740 1750
HAKAIIADDS ATQQDVDNAL KALTDAYAGL TEKTPEPAPV SKSELDKKIK
1760 1770 1780 1790 1800
AIEAEKLDGS KYTAESWKAF ETALAHAKAV IASDSATQQD VDAALGALTS
1810 1820 1830 1840 1850
ARDGLTEKGE VKPDPKPEPG TVDKAALDKA VKKVEAEKLD GSKYTAESWK
1860 1870 1880 1890 1900
AFETALAHAK AVIGNANSTQ FDIDNALSML NDARAALKEK PGRIIAIIDG
1910 1920 1930
SALSKTGASV ASIASVAAAM LAVGAGVMAL RRKRF
Length:1,935
Mass (Da):206,689
Last modified:January 11, 2011 - v1
Checksum:i299ABBEA7070E160
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO52712.1.
RefSeqiYP_003938286.1. NC_014616.1.

Genome annotation databases

EnsemblBacteriaiADO52712; ADO52712; BBIF_0507.
GeneIDi9846715.
KEGGibbi:BBIF_0507.
PATRICi42478433. VBIBifBif172477_0519.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO52712.1.
RefSeqiYP_003938286.1. NC_014616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO52712; ADO52712; BBIF_0507.
GeneIDi9846715.
KEGGibbi:BBIF_0507.
PATRICi42478433. VBIBifBif172477_0519.

Phylogenomic databases

HOGENOMiHOG000158372.
KOiK01190.
OMAiFYQSQWN.

Enzyme and pathway databases

BioCyciBBIF883062:GH1R-526-MONOMER.

Family and domain databases

Gene3Di2.60.120.260. 3 hits.
2.60.40.320. 1 hit.
2.60.40.920. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR003344. Big_1.
IPR011081. Big_4.
IPR000421. Coagulation_fac_5/8-C_type_dom.
IPR011490. FIVAR_dom.
IPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR008964. Invasin/intimin_cell_adhesion.
[Graphical view]
PfamiPF07532. Big_4. 2 hits.
PF00754. F5_F8_type_C. 2 hits.
PF07554. FIVAR. 3 hits.
PF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSiPR00132. GLHYDRLASE2.
SUPFAMiSSF49303. SSF49303. 1 hit.
SSF49373. SSF49373. 1 hit.
SSF49785. SSF49785. 3 hits.
SSF51445. SSF51445. 1 hit.
PROSITEiPS50022. FA58C_3. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S17Imported.

Entry informationi

Entry nameiE3EMP5_BIFBS
AccessioniPrimary (citable) accession number: E3EMP5
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: February 4, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.