Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Aminotransferase

Gene

BBIF_0870

Organism
Bifidobacterium bifidum (strain S17)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. sequence-specific DNA binding Source: InterPro
  3. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciBBIF883062:GH1R-894-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
AminotransferaseImported
Gene namesi
Ordered Locus Names:BBIF_0870Imported
OrganismiBifidobacterium bifidum (strain S17)Imported
Taxonomic identifieri883062 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000006869: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3EM68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3EM68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MESFATRLRT AMNARHLRQV DIVRAAQASG VKLGKSHISQ YVSGKTTPRA
60 70 80 90 100
DTLRFLADTL QVDEQWLLGH DRGRPGMPAQ PKRVPDNPGG RADAPRTPSS
110 120 130 140 150
QAPAPQTTSP SHELEGTPMR HFNKSTKLDN VLYDVRGPVV DEAARMEQSG
160 170 180 190 200
MHVLKLNIGN PAPFGFRTPD EVVYDMSRQL SDTEGYSASK GLFSARKAIM
210 220 230 240 250
QYAQLKNLPN VGIEDIYTGN GVSELINLSL SALLDNGDEV LVPSPDYPLW
260 270 280 290 300
TACVNLAGGT AVHYVCDEES EWYPDIDDMR SKITDRTVAI VLINPNNPTG
310 320 330 340 350
ALYPKEVLQQ IVDLAREHQL MIFSDEIYDR LVMDGLHHVS IASMAPDLFC
360 370 380 390 400
VTFSGLSKSH MIAGYRIGWM VLSGNKSIAK DYIEGINMLT NMRICSNVPA
410 420 430 440 450
QSIVQTALGG HQSVNDYIVP GGRLYEQREY IYNALNSIPG VTAVKPKAAF
460 470 480 490 500
YIFPKLDVKK FNITDDEQFA LDLLHDKRIL ITRGGGFNWH EPDHFRIVYL
510 520
PRIEVLKDAT EKLTDFLSCY RQ
Length:522
Mass (Da):58,134
Last modified:January 11, 2011 - v1
Checksum:i9BAED0F1370A422F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO53075.1.
RefSeqiYP_003938649.1. NC_014616.1.

Genome annotation databases

EnsemblBacteriaiADO53075; ADO53075; BBIF_0870.
GeneIDi9847083.
KEGGibbi:BBIF_0870.
PATRICi42479199. VBIBifBif172477_0897.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002220 Genomic DNA. Translation: ADO53075.1.
RefSeqiYP_003938649.1. NC_014616.1.

3D structure databases

ProteinModelPortaliE3EM68.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO53075; ADO53075; BBIF_0870.
GeneIDi9847083.
KEGGibbi:BBIF_0870.
PATRICi42479199. VBIBifBif172477_0897.

Phylogenomic databases

HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.

Enzyme and pathway databases

BioCyciBBIF883062:GH1R-894-MONOMER.

Family and domain databases

Gene3Di1.10.260.40. 1 hit.
3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR001387. Cro/C1-type_HTH.
IPR010982. Lambda_DNA-bd_dom.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SMARTiSM00530. HTH_XRE. 1 hit.
[Graphical view]
SUPFAMiSSF47413. SSF47413. 1 hit.
SSF53383. SSF53383. 1 hit.
PROSITEiPS50943. HTH_CROC1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S17Imported.

Entry informationi

Entry nameiE3EM68_BIFBS
AccessioniPrimary (citable) accession number: E3EM68
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: March 4, 2015
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.