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Protein
Submitted name:

Superoxide dismutase

Gene

sodF

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Enzyme and pathway databases

BioCyciPPOL886882:G1GOE-807-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutaseImported
Gene namesi
Name:sodFImported
ORF Names:PPSC2_03965Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000006868 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi886882.PPSC2_c0798

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini258 – 338Sod_Fe_NInterPro annotationAdd BLAST81
Domaini345 – 447Sod_Fe_CInterPro annotationAdd BLAST103

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili127 – 151Sequence analysisAdd BLAST25
Coiled coili287 – 307Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000065349
KOiK04564
OMAiKHHLSYV
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR021328 DUF2935
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF11155 DUF2935, 1 hit
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

E3ECK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSTYGSFLP LRVLEEIRHW KQQESWHVEV IKSATEGLEP AYVRLLDDWR
60 70 80 90 100
TVFEQTERAA IELLEEQRSA LDPVEQAWQH QEKKASSAPQ AHTHQLDESS
110 120 130 140 150
AHSRGSDASA TGEKPLSESG LNSQPASQEL NRRLDDLLQT ANRQSQEYVR
160 170 180 190 200
QLGLLTEHSH ALRQQPKSAG VVIHAAHESQ YFLISTTPFQ EPGSIARATG
210 220 230 240 250
LYHVAAEGED YPEQAFRERH ASMRGEGSGA TKGVQSGQTQ PSAAEKSLVG
260 270 280 290 300
RPVPIGGHRL PPLPYPYNAL EPYIDEKTMR IHHNKHHLSY VNDLNKAEKK
310 320 330 340 350
LEEARKTGDF DLVKHWEREL AFNGAGHYLH TLFWTIMSPQ GGGNPSGPLA
360 370 380 390 400
EQIKKDFGSY DAFKKQFSSA AEKVEGGGWA ILVWSPRSGR LEILQAEKHQ
410 420 430 440 450
NLTQWESIPL LAIDVWEHAY YLKHQAERNK YIEDWWHVVN WPEVEARYAQ

ASKLRWQPF
Length:459
Mass (Da):52,143
Last modified:January 11, 2011 - v1
Checksum:i62F32FC3129246EC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA Translation: ADO54781.1
RefSeqiWP_013369417.1, NC_014622.2

Genome annotation databases

EnsemblBacteriaiADO54781; ADO54781; PPSC2_03965
GeneIDi25385459
KEGGippm:PPSC2_03965
PATRICifig|886882.15.peg.788

Similar proteinsi

Entry informationi

Entry nameiE3ECK9_PAEPS
AccessioniPrimary (citable) accession number: E3ECK9
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: March 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health