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Protein

Superoxide dismutase

Gene

sodA

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi27Divalent metal cationUniRule annotation1
Metal bindingi82Divalent metal cationUniRule annotation1
Metal bindingi165Divalent metal cationUniRule annotation1
Metal bindingi169Divalent metal cationUniRule annotation1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductaseUniRule annotation
LigandMetal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciPPOL886882:G1GOE-799-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
ORF Names:PPSC2_03925Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000006868 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi886882.PPSC2_c0788

Structurei

3D structure databases

ProteinModelPortaliE3ECJ9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 89Sod_Fe_NInterPro annotationAdd BLAST87
Domaini97 – 198Sod_Fe_CInterPro annotationAdd BLAST102

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105CK4 Bacteria
COG0605 LUCA
HOGENOMiHOG000013583
KOiK04564
OMAiKWGSFDK
OrthoDBiPOG091H03Q7

Family and domain databases

Gene3Di1.10.287.990, 1 hit
2.40.500.20, 1 hit
InterProiView protein in InterPro
IPR001189 Mn/Fe_SOD
IPR019833 Mn/Fe_SOD_BS
IPR019832 Mn/Fe_SOD_C
IPR019831 Mn/Fe_SOD_N
IPR036324 Mn/Fe_SOD_N_sf
IPR036314 SOD_C_sf
PfamiView protein in Pfam
PF02777 Sod_Fe_C, 1 hit
PF00081 Sod_Fe_N, 1 hit
PIRSFiPIRSF000349 SODismutase, 1 hit
PRINTSiPR01703 MNSODISMTASE
SUPFAMiSSF46609 SSF46609, 1 hit
SSF54719 SSF54719, 1 hit
PROSITEiView protein in PROSITE
PS00088 SOD_MN, 1 hit

Sequencei

Sequence statusi: Complete.

E3ECJ9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFQLPELPY AKDALEPHFD ALTMEIHHDR HHNTYVTNLN AALESAPELQ
60 70 80 90 100
SKSLEDLISN LDSVPESIRT AVRNNGGGHH NHSLFWEVIG PNGGGQPTGA
110 120 130 140 150
IAEAINNELG GYDKFKEDFT KAATTRFGSG WAWLVVGKDG KLAITSTPNQ
160 170 180 190 200
DSPLFEGLTP VLGLDVWEHA YYLKYQNKRP DYIAAFYNVI NWDEVNKRYA

AAKK
Length:204
Mass (Da):22,724
Last modified:January 11, 2011 - v1
Checksum:i1D8237BF758A3819
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA Translation: ADO54771.1
RefSeqiWP_013369407.1, NC_014622.2

Genome annotation databases

EnsemblBacteriaiADO54771; ADO54771; PPSC2_03925
GeneIDi25385451
KEGGippm:PPSC2_03925
PATRICifig|886882.15.peg.779

Similar proteinsi

Entry informationi

Entry nameiE3ECJ9_PAEPS
AccessioniPrimary (citable) accession number: E3ECJ9
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: March 28, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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