Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E3EBZ3

- E3EBZ3_PAEPS

UniProt

E3EBZ3 - E3EBZ3_PAEPS

Protein
Submitted name:

Alpha amylase catalytic region

Gene

PPSC2_c5179

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. calcium ion binding Source: InterPro
    2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciPPOL886882:GBY1-5329-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha amylase catalytic regionImported
    Gene namesi
    Ordered Locus Names:PPSC2_c5179Imported
    OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
    Taxonomic identifieri886882 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000006868: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000094847.
    KOiK01176.
    OMAiFNGTDYD.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    E3EBZ3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKRNHTMMQF FEWNVKADGS HWKKLARLAP ELKAKGIDAI WIPPVTKGQS    50
    PEDTGYGVYD LYDLGEFDQK GAVRTKYGTR EDLLEAVASC VRHGVAVYVD 100
    LVMNHKAGAD ETEVFKVVEV NPDNRNEVIS EPFDIEGWTK FTFPGRQGKY 150
    STFQWNFEHF NGTDYDASQD RTGIYRILGK NKNWSDNVDD EFGNYDYLMF 200
    ANIDYNHQDV RKEMIRWGKW LVDTLQCNGF RLDAIKHINH EFVREFATEM 250
    IKKRGQDFYM VGEFWKPDLE SCQKFLDTID YKIDLFDVSL HYKLHSASLG 300
    GKDFDLSTIF EDTLVHTHPL NSVTFVDNHD SQPHEALESW VEDWFKPSAY 350
    ALILLRKDGY PCVFYGDYYG IQGQTPVEGK QAELDPLLYA RYHKAYGEQK 400
    DYFDDPHTIG WVRQGIPELH GSGCAVVITN ANDGEKRMFV GKQRAGEKWT 450
    DLTGHHDHTI KIEQDGYGIF PVRAGSVSVW ALPTEEDSLD AEDTASA 497
    Length:497
    Mass (Da):57,151
    Last modified:January 11, 2011 - v1
    Checksum:i89B4CDF2DB1A97FA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO59117.1.
    RefSeqiYP_003949358.1. NC_014622.1.

    Genome annotation databases

    EnsemblBacteriaiADO59117; ADO59117; PPSC2_c5179.
    GeneIDi9853455.
    KEGGippm:PPSC2_c5179.
    PATRICi42513466. VBIPaePol172748_4956.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO59117.1 .
    RefSeqi YP_003949358.1. NC_014622.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO59117 ; ADO59117 ; PPSC2_c5179 .
    GeneIDi 9853455.
    KEGGi ppm:PPSC2_c5179.
    PATRICi 42513466. VBIPaePol172748_4956.

    Phylogenomic databases

    HOGENOMi HOG000094847.
    KOi K01176.
    OMAi FNGTDYD.

    Enzyme and pathway databases

    BioCyci PPOL886882:GBY1-5329-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR013776. A-amylase_thermo.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
      Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
      J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SC2Imported.

    Entry informationi

    Entry nameiE3EBZ3_PAEPS
    AccessioniPrimary (citable) accession number: E3EBZ3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3