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E3EBZ3

- E3EBZ3_PAEPS

UniProt

E3EBZ3 - E3EBZ3_PAEPS

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Protein
Submitted name: Alpha amylase catalytic region
Gene
PPSC2_c5179
Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. calcium ion binding Source: InterPro
  2. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciPPOL886882:GBY1-5329-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:PPSC2_c5179Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000006868: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000094847.
KOiK01176.
OMAiFNGTDYD.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E3EBZ3-1 [UniParc]FASTAAdd to Basket

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MKRNHTMMQF FEWNVKADGS HWKKLARLAP ELKAKGIDAI WIPPVTKGQS    50
PEDTGYGVYD LYDLGEFDQK GAVRTKYGTR EDLLEAVASC VRHGVAVYVD 100
LVMNHKAGAD ETEVFKVVEV NPDNRNEVIS EPFDIEGWTK FTFPGRQGKY 150
STFQWNFEHF NGTDYDASQD RTGIYRILGK NKNWSDNVDD EFGNYDYLMF 200
ANIDYNHQDV RKEMIRWGKW LVDTLQCNGF RLDAIKHINH EFVREFATEM 250
IKKRGQDFYM VGEFWKPDLE SCQKFLDTID YKIDLFDVSL HYKLHSASLG 300
GKDFDLSTIF EDTLVHTHPL NSVTFVDNHD SQPHEALESW VEDWFKPSAY 350
ALILLRKDGY PCVFYGDYYG IQGQTPVEGK QAELDPLLYA RYHKAYGEQK 400
DYFDDPHTIG WVRQGIPELH GSGCAVVITN ANDGEKRMFV GKQRAGEKWT 450
DLTGHHDHTI KIEQDGYGIF PVRAGSVSVW ALPTEEDSLD AEDTASA 497
Length:497
Mass (Da):57,151
Last modified:January 11, 2011 - v1
Checksum:i89B4CDF2DB1A97FA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002213 Genomic DNA. Translation: ADO59117.1.
RefSeqiYP_003949358.1. NC_014622.1.

Genome annotation databases

EnsemblBacteriaiADO59117; ADO59117; PPSC2_c5179.
GeneIDi9853455.
KEGGippm:PPSC2_c5179.
PATRICi42513466. VBIPaePol172748_4956.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002213 Genomic DNA. Translation: ADO59117.1 .
RefSeqi YP_003949358.1. NC_014622.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADO59117 ; ADO59117 ; PPSC2_c5179 .
GeneIDi 9853455.
KEGGi ppm:PPSC2_c5179.
PATRICi 42513466. VBIPaePol172748_4956.

Phylogenomic databases

HOGENOMi HOG000094847.
KOi K01176.
OMAi FNGTDYD.

Enzyme and pathway databases

BioCyci PPOL886882:GBY1-5329-MONOMER.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
    Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
    J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SC2Imported.

Entry informationi

Entry nameiE3EBZ3_PAEPS
AccessioniPrimary (citable) accession number: E3EBZ3
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: October 16, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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