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E3E900 (E3E900_PAEPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PPSC2_c5270 EMBL ADO59207.1
OrganismPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa) [Complete proteome] [HAMAP]
Taxonomic identifier886882 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
E3E900 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 9492DAC72A89B233

FASTA48955,130
        10         20         30         40         50         60 
MNPHVYNPSQ LFAQSMIYEP LVSYKQGGKL EPALAESWTI SKDGKTYTFK LRKGVKFSDG 

        70         80         90        100        110        120 
TLFNAAIVKK NFDAIMKNEK THSWLGIVGV LDKTEAVDDS TFRMTLKEPY YPVLQDLSVV 

       130        140        150        160        170        180 
RPFRFLGEAG FPDDGDTSKG IKKPVGTGPW MLDEYKQDEY ATFKRNPNYW GTAPKVDKIT 

       190        200        210        220        230        240 
VKIIPDGETR VMAFEKGDLD LIYGEGVISL DAFKQLRDTN QYVTTLSEPV GTRSLLLNSS 

       250        260        270        280        290        300 
NPKLADLRVR LALQHGFNKQ AMVEGVTSGL EETADTVLSK NYPYTNVDLQ PIGYDVEKSK 

       310        320        330        340        350        360 
ALLDEAGWKL PAGGTVREKD GQQMDFELIF DKTDPIQKAM AETIQAEWGE LGVKVNLTGL 

       370        380        390        400        410        420 
ELTVQIKRLR SNQFDLYFWY NYGAPYDPHS FINVIAKKSF GISEVLSALP MKKDLDQQVH 

       430        440        450        460        470        480 
EALSSTDETK RQELYASILK TLQEQSAIVP ISYIKKTAVY QKKITNFVFP ANRDENPFEG 


IEIGKQLKR 

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References

[1]"Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SC2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002213 Genomic DNA. Translation: ADO59207.1.
RefSeqYP_003949448.1. NC_014622.1.

3D structure databases

ProteinModelPortalE3E900.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO59207; ADO59207; PPSC2_c5270.
GeneID9853545.
KEGGppm:PPSC2_c5270.
PATRIC42513642. VBIPaePol172748_5044.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000125740.
KOK15584.
OMAQAMVEGV.

Family and domain databases

InterProIPR011980. NikA_ABC_Ni-bd.
IPR000914. SBP_bac_5.
IPR023765. SBP_bac_5_CS.
[Graphical view]
PfamPF00496. SBP_bac_5. 1 hit.
[Graphical view]
TIGRFAMsTIGR02294. nickel_nikA. 1 hit.
PROSITEPS01040. SBP_BACTERIAL_5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3E900_PAEPS
AccessionPrimary (citable) accession number: E3E900
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)