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Protein
Submitted name:

Alpha-amylase

Gene

amyB7

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciPPOL886882:GBY1-5371-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:amyB7Imported
ORF Names:PPSC2_24470Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000006868 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi886882.PPSC2_c5221.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000165623.
KOiK01176.
OMAiAFNDGNN.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006048. A-amylase_b_C.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR000125. Glyco_hydro_14A_bac.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 2 hits.
PF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00841. GLHYDLASE14A.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 2 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3E7E7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTLYRSLWKK GCMLLLSLVL SLTAFIGSPS NTASAAVADD FQASVMGPLA
60 70 80 90 100
KINDWGSFKK QLQTLKNNGV YAITTDVWWG YVESAGDNQF DWSYYKTYAN
110 120 130 140 150
AVKEAGLKWV PIISTHKCGG NVGDDCNIPL PSWLSSKGSA DEMQFKDESG
160 170 180 190 200
YANSEALSPL WSGTGKQYDE LYASFAENFA GYKSIIPKIY LSGGPSGELR
210 220 230 240 250
YPSYYPAAGW SYPGRGKFQA YTETAKNAFR TAMNDKYGSL DKLNAAWGTK
260 270 280 290 300
LTSLSQINPP TDGDGFYTNG GYNSAYGKDF LSWYQSVLEK HLGVIGAAAH
310 320 330 340 350
KNFDSVFGVR IGAKISGLHW QMNNPAMPHG TEQAGGYYDY NRLIQKFKDA
360 370 380 390 400
DLDLTFTCLE MSDSGTAPNY SLPSTLVDTV SSIANAKGVR LNGENALPTG
410 420 430 440 450
GSGFQKIEEK ITKFGYHGFT LLRINNLVNN DGSPTGELSG FKQYIISKAK
460 470 480 490 500
PDNNGGTGNK VTIYYKKGFN SPYIHYRPAG GSWTAAPGVK MQDAEISGYA
510 520 530 540 550
KITVDIGSAS QLEAAFNDGN NNWDSNNTKN YSFSTGTSTY TPGNSGNAGT
560 570 580 590 600
ITSGAPSGAN PGDGGGTTNK VTVYYKKGFN SPYIHYRPAG GSWTAAPGVK
610 620 630 640 650
MQDAEISGYA KITVDIGSAS QLEAAFNDGN NNWDSNNTKN YLFSTGTSTY
660 670 680 690 700
TPGSNGAAGT IRTGAPSGSV LSVVTSTYAT DLNEVTGPIQ AEKLSGVSLN
710 720 730 740 750
VSTSTYAPNS NGVEVTAQTE APSGAFTPMD LGTLSNPTSL NTDWSKQSIY
760 770 780 790 800
FIMTDRFSNG DPSNDNYGGF NSNNNDQRKW HGGDFQGIID KLDYIKNMGF
810 820 830 840 850
TAIWITPVTM QKSEYAYHGY HTYDFYAVDG HLGTMDKFQE LVRKAHDKNI
860 870 880 890 900
AVMLDVVVNH TGDFQPGNGF AKAPFDKADW YHHNGDITGG DYDSNNQWKI
910 920 930 940 950
ENGDVAGLDD LNHENPATAN ELKNWIKWLL NETGIDGLRL DTVKHVPKGF
960 970 980 990 1000
LKDFDQAANT FTMGEIFHGD PAYVGDYTRY LDAALDFPMY YTIKDVFGHD
1010 1020 1030 1040 1050
QSMRKIKDRY SDDRYYRDAQ TNGVFIDNHD VKRFLNDASG KPGANYDKWP
1060 1070 1080 1090 1100
QLKAALGFTL TSRGIPIIYQ GTEQGYSGGD DPANRENMNF NANHDLYQYI
1110 1120 1130 1140 1150
AKLNNVRNNH PALQNGSQKE KWVDDSFYSF QRSKNGDEAI VFINNSWNSQ
1160 1170 1180 1190
TRTIGNFDNL SNGTRLTNQL SNDSVQINNG SITVTLAPKE VKIFTK
Length:1,196
Mass (Da):130,845
Last modified:January 11, 2011 - v1
Checksum:iECF2BA51376F9675
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA. Translation: ADO59158.1.
RefSeqiWP_013373692.1. NC_014622.1.
YP_003949399.1. NC_014622.1.

Genome annotation databases

EnsemblBacteriaiADO59158; ADO59158; PPSC2_c5221.
GeneIDi9853496.
KEGGippm:PPSC2_c5221.
PATRICi42513548. VBIPaePol172748_4997.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA. Translation: ADO59158.1.
RefSeqiWP_013373692.1. NC_014622.1.
YP_003949399.1. NC_014622.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi886882.PPSC2_c5221.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO59158; ADO59158; PPSC2_c5221.
GeneIDi9853496.
KEGGippm:PPSC2_c5221.
PATRICi42513548. VBIPaePol172748_4997.

Phylogenomic databases

HOGENOMiHOG000165623.
KOiK01176.
OMAiAFNDGNN.

Enzyme and pathway databases

BioCyciPPOL886882:GBY1-5371-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006048. A-amylase_b_C.
IPR005085. CBM_fam25.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR000125. Glyco_hydro_14A_bac.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF03423. CBM_25. 2 hits.
PF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSiPR00750. BETAAMYLASE.
PR00841. GLHYDLASE14A.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01066. CBM_25. 2 hits.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
PS00679. BETA_AMYLASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
    Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
    J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SC2Imported.

Entry informationi

Entry nameiE3E7E7_PAEPS
AccessioniPrimary (citable) accession number: E3E7E7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 24, 2015
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.