Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E3E7E7

- E3E7E7_PAEPS

UniProt

E3E7E7 - E3E7E7_PAEPS

Protein
Submitted name:

Alpha-amylase

Gene

PPSC2_c5221

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. beta-amylase activity Source: InterPro
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. polysaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciPPOL886882:GBY1-5371-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Ordered Locus Names:PPSC2_c5221Imported
    OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
    Taxonomic identifieri886882 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000006868: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000165623.
    KOiK01176.
    OMAiAFNDGNN.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR006048. A-amylase_b_C.
    IPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR000125. Glyco_hydro_14A_bac.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 2 hits.
    PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view]
    PRINTSiPR00750. BETAAMYLASE.
    PR00841. GLHYDLASE14A.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01066. CBM_25. 2 hits.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    PROSITEiPS00506. BETA_AMYLASE_1. 1 hit.
    PS00679. BETA_AMYLASE_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3E7E7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTLYRSLWKK GCMLLLSLVL SLTAFIGSPS NTASAAVADD FQASVMGPLA     50
    KINDWGSFKK QLQTLKNNGV YAITTDVWWG YVESAGDNQF DWSYYKTYAN 100
    AVKEAGLKWV PIISTHKCGG NVGDDCNIPL PSWLSSKGSA DEMQFKDESG 150
    YANSEALSPL WSGTGKQYDE LYASFAENFA GYKSIIPKIY LSGGPSGELR 200
    YPSYYPAAGW SYPGRGKFQA YTETAKNAFR TAMNDKYGSL DKLNAAWGTK 250
    LTSLSQINPP TDGDGFYTNG GYNSAYGKDF LSWYQSVLEK HLGVIGAAAH 300
    KNFDSVFGVR IGAKISGLHW QMNNPAMPHG TEQAGGYYDY NRLIQKFKDA 350
    DLDLTFTCLE MSDSGTAPNY SLPSTLVDTV SSIANAKGVR LNGENALPTG 400
    GSGFQKIEEK ITKFGYHGFT LLRINNLVNN DGSPTGELSG FKQYIISKAK 450
    PDNNGGTGNK VTIYYKKGFN SPYIHYRPAG GSWTAAPGVK MQDAEISGYA 500
    KITVDIGSAS QLEAAFNDGN NNWDSNNTKN YSFSTGTSTY TPGNSGNAGT 550
    ITSGAPSGAN PGDGGGTTNK VTVYYKKGFN SPYIHYRPAG GSWTAAPGVK 600
    MQDAEISGYA KITVDIGSAS QLEAAFNDGN NNWDSNNTKN YLFSTGTSTY 650
    TPGSNGAAGT IRTGAPSGSV LSVVTSTYAT DLNEVTGPIQ AEKLSGVSLN 700
    VSTSTYAPNS NGVEVTAQTE APSGAFTPMD LGTLSNPTSL NTDWSKQSIY 750
    FIMTDRFSNG DPSNDNYGGF NSNNNDQRKW HGGDFQGIID KLDYIKNMGF 800
    TAIWITPVTM QKSEYAYHGY HTYDFYAVDG HLGTMDKFQE LVRKAHDKNI 850
    AVMLDVVVNH TGDFQPGNGF AKAPFDKADW YHHNGDITGG DYDSNNQWKI 900
    ENGDVAGLDD LNHENPATAN ELKNWIKWLL NETGIDGLRL DTVKHVPKGF 950
    LKDFDQAANT FTMGEIFHGD PAYVGDYTRY LDAALDFPMY YTIKDVFGHD 1000
    QSMRKIKDRY SDDRYYRDAQ TNGVFIDNHD VKRFLNDASG KPGANYDKWP 1050
    QLKAALGFTL TSRGIPIIYQ GTEQGYSGGD DPANRENMNF NANHDLYQYI 1100
    AKLNNVRNNH PALQNGSQKE KWVDDSFYSF QRSKNGDEAI VFINNSWNSQ 1150
    TRTIGNFDNL SNGTRLTNQL SNDSVQINNG SITVTLAPKE VKIFTK 1196
    Length:1,196
    Mass (Da):130,845
    Last modified:January 11, 2011 - v1
    Checksum:iECF2BA51376F9675
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO59158.1.
    RefSeqiYP_003949399.1. NC_014622.1.

    Genome annotation databases

    EnsemblBacteriaiADO59158; ADO59158; PPSC2_c5221.
    GeneIDi9853496.
    KEGGippm:PPSC2_c5221.
    PATRICi42513548. VBIPaePol172748_4997.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO59158.1 .
    RefSeqi YP_003949399.1. NC_014622.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO59158 ; ADO59158 ; PPSC2_c5221 .
    GeneIDi 9853496.
    KEGGi ppm:PPSC2_c5221.
    PATRICi 42513548. VBIPaePol172748_4997.

    Phylogenomic databases

    HOGENOMi HOG000165623.
    KOi K01176.
    OMAi AFNDGNN.

    Enzyme and pathway databases

    BioCyci PPOL886882:GBY1-5371-MONOMER.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR006048. A-amylase_b_C.
    IPR005085. CBM_fam25.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR001554. Glyco_hydro_14.
    IPR018238. Glyco_hydro_14_CS.
    IPR000125. Glyco_hydro_14A_bac.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF03423. CBM_25. 2 hits.
    PF01373. Glyco_hydro_14. 1 hit.
    [Graphical view ]
    PRINTSi PR00750. BETAAMYLASE.
    PR00841. GLHYDLASE14A.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01066. CBM_25. 2 hits.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    PROSITEi PS00506. BETA_AMYLASE_1. 1 hit.
    PS00679. BETA_AMYLASE_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
      Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
      J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SC2Imported.

    Entry informationi

    Entry nameiE3E7E7_PAEPS
    AccessioniPrimary (citable) accession number: E3E7E7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3