Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

E3E6W9

- E3E6W9_PAEPS

UniProt

E3E6W9 - E3E6W9_PAEPS

Protein

Xylose isomerase

Gene

xylA

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 27 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei99 – 991UniRule annotation
    Active sitei102 – 1021UniRule annotation
    Metal bindingi230 – 2301Magnesium 1UniRule annotation
    Metal bindingi266 – 2661Magnesium 1UniRule annotation
    Metal bindingi266 – 2661Magnesium 2UniRule annotation
    Metal bindingi269 – 2691Magnesium 2UniRule annotation
    Metal bindingi294 – 2941Magnesium 1UniRule annotation
    Metal bindingi305 – 3051Magnesium 2UniRule annotation
    Metal bindingi307 – 3071Magnesium 2UniRule annotation
    Metal bindingi337 – 3371Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciPPOL886882:GBY1-4702-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:PPSC2_c4572Imported
    OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
    Taxonomic identifieri886882 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000006868: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliE3E6W9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000252293.
    KOiK01805.
    OMAiCMDATHK.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3E6W9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAYFEQVSKI NFEGKQSDNP FAFKFYNPQE IVAGKTMEEH LRFSMAYWHT    50
    LVAGGSDPFG VETAERPWSK FTGLDLAKAR VEAAFELLDK LNLPYFAFHD 100
    VDIAPEGASL KEFYSNLDTI VDLIEEHMKA TGKKLLWNTA NMFSHPRYLH 150
    GAATTCNADV YAHAAAQIKK GLEVGKRLGA DNYVFWGGRE GYETLLNTDL 200
    KLEQDNLGRM FHMAVDYARE IGFDAQFLIE PKPKEPTKHQ YDFDAATTIA 250
    FLQKYDLDQH FKLNLEANHA TLAGHTFDHE VRVARVNGML GSLDANQGDL 300
    LLGWDTDEFP VDLYDATLTM YEVLQNEGLG RGGINFDAKV RRASFEPEDL 350
    FLAHIAGMDT YAKGLKVAAK LIEDRVFEDF IEKRYSSFKE GIGADIVSGK 400
    ATLASLAEYA LANEAPRKNV SGRQEYLKAT LNQYILAD 438
    Length:438
    Mass (Da):49,240
    Last modified:January 11, 2011 - v1
    Checksum:i2B8FAF868E80914C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO58521.1.
    RefSeqiWP_013373089.1. NC_014622.1.
    YP_003948762.1. NC_014622.1.

    Genome annotation databases

    EnsemblBacteriaiADO58521; ADO58521; PPSC2_c4572.
    GeneIDi9852860.
    KEGGippm:PPSC2_c4572.
    PATRICi42512252. VBIPaePol172748_4367.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO58521.1 .
    RefSeqi WP_013373089.1. NC_014622.1.
    YP_003948762.1. NC_014622.1.

    3D structure databases

    ProteinModelPortali E3E6W9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO58521 ; ADO58521 ; PPSC2_c4572 .
    GeneIDi 9852860.
    KEGGi ppm:PPSC2_c4572.
    PATRICi 42512252. VBIPaePol172748_4367.

    Phylogenomic databases

    HOGENOMi HOG000252293.
    KOi K01805.
    OMAi CMDATHK.

    Enzyme and pathway databases

    BioCyci PPOL886882:GBY1-4702-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
      Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
      J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SC2Imported.

    Entry informationi

    Entry nameiE3E6W9_PAEPS
    AccessioniPrimary (citable) accession number: E3E6W9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 27 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3