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Protein

Xylose isomerase

Gene

xylA

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei99UniRule annotation1
Active sitei102UniRule annotation1
Metal bindingi230Magnesium 1UniRule annotation1
Metal bindingi266Magnesium 1UniRule annotation1
Metal bindingi266Magnesium 2UniRule annotation1
Metal bindingi269Magnesium 2UniRule annotation1
Metal bindingi294Magnesium 1UniRule annotation1
Metal bindingi305Magnesium 2UniRule annotation1
Metal bindingi307Magnesium 2UniRule annotation1
Metal bindingi337Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotationSAAS annotation
LigandMagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciPPOL886882:G1GOE-4369-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotation
Synonyms:xylA3Imported
ORF Names:PPSC2_21440Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
Proteomesi
  • UP000006868 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi886882.PPSC2_c4572

Structurei

3D structure databases

ProteinModelPortaliE3E6W9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C93 Bacteria
COG2115 LUCA
HOGENOMiHOG000252293
KOiK01805
OMAiHTFQHEL
OrthoDBiPOG091H07LC

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

E3E6W9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYFEQVSKI NFEGKQSDNP FAFKFYNPQE IVAGKTMEEH LRFSMAYWHT
60 70 80 90 100
LVAGGSDPFG VETAERPWSK FTGLDLAKAR VEAAFELLDK LNLPYFAFHD
110 120 130 140 150
VDIAPEGASL KEFYSNLDTI VDLIEEHMKA TGKKLLWNTA NMFSHPRYLH
160 170 180 190 200
GAATTCNADV YAHAAAQIKK GLEVGKRLGA DNYVFWGGRE GYETLLNTDL
210 220 230 240 250
KLEQDNLGRM FHMAVDYARE IGFDAQFLIE PKPKEPTKHQ YDFDAATTIA
260 270 280 290 300
FLQKYDLDQH FKLNLEANHA TLAGHTFDHE VRVARVNGML GSLDANQGDL
310 320 330 340 350
LLGWDTDEFP VDLYDATLTM YEVLQNEGLG RGGINFDAKV RRASFEPEDL
360 370 380 390 400
FLAHIAGMDT YAKGLKVAAK LIEDRVFEDF IEKRYSSFKE GIGADIVSGK
410 420 430
ATLASLAEYA LANEAPRKNV SGRQEYLKAT LNQYILAD
Length:438
Mass (Da):49,240
Last modified:January 11, 2011 - v1
Checksum:i2B8FAF868E80914C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA Translation: ADO58521.1
RefSeqiWP_013373089.1, NC_014622.2

Genome annotation databases

EnsemblBacteriaiADO58521; ADO58521; PPSC2_21440
GeneIDi25388904
KEGGippm:PPSC2_21440
PATRICifig|886882.15.peg.4558

Similar proteinsi

Entry informationi

Entry nameiE3E6W9_PAEPS
AccessioniPrimary (citable) accession number: E3E6W9
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 23, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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