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E3E6W9 (E3E6W9_PAEPS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length438 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. HAMAP-Rule MF_00455 RuleBase RU000609 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 RuleBase RU000610 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. HAMAP-Rule MF_00455 RuleBase RU000609

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site991 By similarity HAMAP-Rule MF_00455
Active site1021 By similarity HAMAP-Rule MF_00455
Metal binding2301Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2661Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2661Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2691Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2941Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3051Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3071Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3371Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
E3E6W9 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 2B8FAF868E80914C

FASTA43849,240
        10         20         30         40         50         60 
MAYFEQVSKI NFEGKQSDNP FAFKFYNPQE IVAGKTMEEH LRFSMAYWHT LVAGGSDPFG 

        70         80         90        100        110        120 
VETAERPWSK FTGLDLAKAR VEAAFELLDK LNLPYFAFHD VDIAPEGASL KEFYSNLDTI 

       130        140        150        160        170        180 
VDLIEEHMKA TGKKLLWNTA NMFSHPRYLH GAATTCNADV YAHAAAQIKK GLEVGKRLGA 

       190        200        210        220        230        240 
DNYVFWGGRE GYETLLNTDL KLEQDNLGRM FHMAVDYARE IGFDAQFLIE PKPKEPTKHQ 

       250        260        270        280        290        300 
YDFDAATTIA FLQKYDLDQH FKLNLEANHA TLAGHTFDHE VRVARVNGML GSLDANQGDL 

       310        320        330        340        350        360 
LLGWDTDEFP VDLYDATLTM YEVLQNEGLG RGGINFDAKV RRASFEPEDL FLAHIAGMDT 

       370        380        390        400        410        420 
YAKGLKVAAK LIEDRVFEDF IEKRYSSFKE GIGADIVSGK ATLASLAEYA LANEAPRKNV 

       430 
SGRQEYLKAT LNQYILAD 

« Hide

References

[1]"Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: SC2 EMBL ADO58521.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002213 Genomic DNA. Translation: ADO58521.1.
RefSeqYP_003948762.1. NC_014622.1.

3D structure databases

ProteinModelPortalE3E6W9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO58521; ADO58521; PPSC2_c4572.
GeneID9852860.
KEGGppm:PPSC2_c4572.
PATRIC42512252. VBIPaePol172748_4367.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000252293.
KOK01805.
OMACMDATHK.

Enzyme and pathway databases

BioCycPPOL886882:GBY1-4702-MONOMER.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3E6W9_PAEPS
AccessionPrimary (citable) accession number: E3E6W9
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 11, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)