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Protein
Submitted name:

Bacillolysin

Gene

PPSC2_c4320

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi341 – 3411Calcium 1Combined sources
Metal bindingi343 – 3431Calcium 1Combined sources
Metal bindingi345 – 3451Calcium 1; via carbonyl oxygenCombined sources
Metal bindingi417 – 4171Calcium 2Combined sources
Metal bindingi419 – 4191Calcium 2Combined sources
Metal bindingi423 – 4231Zinc; via tele nitrogenCombined sources
Metal bindingi427 – 4271Zinc; via tele nitrogenCombined sources
Metal bindingi447 – 4471ZincCombined sources
Metal bindingi458 – 4581Calcium 2Combined sources
Metal bindingi466 – 4661Calcium 2Combined sources
Metal bindingi469 – 4691Calcium 3; via carbonyl oxygenCombined sources
Metal bindingi470 – 4701Calcium 3Combined sources
Metal bindingi473 – 4731Calcium 3; via carbonyl oxygenCombined sources
Metal bindingi476 – 4761Calcium 3Combined sources

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. metalloendopeptidase activity Source: InterPro
Complete GO annotation...

Keywords - Ligandi

CalciumCombined sources, Metal-bindingCombined sources, ZincCombined sources

Enzyme and pathway databases

BioCyciPPOL886882:GBY1-4433-MONOMER.

Protein family/group databases

MEROPSiM04.001.

Names & Taxonomyi

Protein namesi
Submitted name:
BacillolysinImported
Gene namesi
Ordered Locus Names:PPSC2_c4320Imported
OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
Taxonomic identifieri886882 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000006868: Chromosome

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4B52X-ray1.76A/B289-592[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000247250.
OMAiPLRTRYI.

Family and domain databases

Gene3Di3.10.170.10. 1 hit.
InterProiIPR011096. FTP_domain.
IPR023612. Peptidase_M4.
IPR001570. Peptidase_M4_C_domain.
IPR013856. Peptidase_M4_domain.
[Graphical view]
PfamiPF07504. FTP. 1 hit.
PF01447. Peptidase_M4. 1 hit.
PF02868. Peptidase_M4_C. 1 hit.
[Graphical view]
PRINTSiPR00730. THERMOLYSIN.

Sequencei

Sequence statusi: Complete.

E3E6L0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKVWVSLLG GAMLLGSVAS GASAESSVSG PAQLTPTFHA EQWKAPTSVS
60 70 80 90 100
GDDIVWSYLN RQKKSLLGVD SSSVREQFRI VDRTSDKSGV SHYRLKQYVN
110 120 130 140 150
GIPVYGAEQT IHVGKSGEVT SYLGAVVNED QQAEATQGTT PKISASEAVY
160 170 180 190 200
TAYKEAAARI EALPTSDDTI SKDAEEPSSV SKDTYAEAAN NEKTLSVDKD
210 220 230 240 250
ELSLDQASVL KDSKIEAVEP EKSSIAKIAN LQPEVDPKAE LYYYPKGDDL
260 270 280 290 300
LLVYVTEVNV LEPAPLRTRY IIDANDGSIV FQYDIINEAT GTGKGVLGDS
310 320 330 340 350
KSFTTTASGS SYQLKDTTRG NGIVTYTASN RQSIPGTILT DADNVWNDPA
360 370 380 390 400
GVDAHAYAAK TYDYYKAKFG RNSIDGRGLQ LRSTVHYGSR YNNAFWNGSQ
410 420 430 440 450
MTYGDGDGST FIAFSGDPDV VGHELTHGVT EYTSNLEYYG ESGALNEAFS
460 470 480 490 500
DVIGNDIQRK NWLVGDDIYT PNIAGDALRS MSNPTLYDQP DHYSNLYRGS
510 520 530 540 550
SDNGGVHTNS GIINKAYYLL AQGGNFHGVT VNGIGRDAAV QIYYSAFTNY
560 570 580 590
LTSSSDFSNA RAAVIQAAKD LYGANSAEAT AAAKSFDAVG VN
Length:592
Mass (Da):63,603
Last modified:January 11, 2011 - v1
Checksum:i27B96B6EA81B604F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA. Translation: ADO58270.1.
RefSeqiYP_003948511.1. NC_014622.1.

Genome annotation databases

EnsemblBacteriaiADO58270; ADO58270; PPSC2_c4320.
GeneIDi9852609.
KEGGippm:PPSC2_c4320.
PATRICi42511738. VBIPaePol172748_4127.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002213 Genomic DNA. Translation: ADO58270.1.
RefSeqiYP_003948511.1. NC_014622.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4B52X-ray1.76A/B289-592[»]
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

MEROPSiM04.001.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO58270; ADO58270; PPSC2_c4320.
GeneIDi9852609.
KEGGippm:PPSC2_c4320.
PATRICi42511738. VBIPaePol172748_4127.

Phylogenomic databases

HOGENOMiHOG000247250.
OMAiPLRTRYI.

Enzyme and pathway databases

BioCyciPPOL886882:GBY1-4433-MONOMER.

Family and domain databases

Gene3Di3.10.170.10. 1 hit.
InterProiIPR011096. FTP_domain.
IPR023612. Peptidase_M4.
IPR001570. Peptidase_M4_C_domain.
IPR013856. Peptidase_M4_domain.
[Graphical view]
PfamiPF07504. FTP. 1 hit.
PF01447. Peptidase_M4. 1 hit.
PF02868. Peptidase_M4_C. 1 hit.
[Graphical view]
PRINTSiPR00730. THERMOLYSIN.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
    Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
    J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SC2Imported.
  2. "Structure of gentlyase, the neutral metalloprotease of Paenibacillus polymyxa."
    Ruf A., Stihle M., Benz J., Schmidt M., Sobek H.
    Acta Crystallogr. D 69:24-31(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 289-592 IN COMPLEX WITH CALCIUM AND ZINC.

Entry informationi

Entry nameiE3E6L0_PAEPS
AccessioniPrimary (citable) accession number: E3E6L0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: January 7, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.