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E3E6L0

- E3E6L0_PAEPS

UniProt

E3E6L0 - E3E6L0_PAEPS

Protein
Submitted name:

Bacillolysin

Gene

PPSC2_c4320

Organism
Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi341 – 3411Calcium 1Imported
    Metal bindingi343 – 3431Calcium 1Imported
    Metal bindingi345 – 3451Calcium 1; via carbonyl oxygenImported
    Metal bindingi417 – 4171Calcium 2Imported
    Metal bindingi419 – 4191Calcium 2Imported
    Metal bindingi423 – 4231Zinc; via tele nitrogenImported
    Metal bindingi427 – 4271Zinc; via tele nitrogenImported
    Metal bindingi447 – 4471ZincImported
    Metal bindingi458 – 4581Calcium 2Imported
    Metal bindingi466 – 4661Calcium 2Imported
    Metal bindingi469 – 4691Calcium 3; via carbonyl oxygenImported
    Metal bindingi470 – 4701Calcium 3Imported
    Metal bindingi473 – 4731Calcium 3; via carbonyl oxygenImported
    Metal bindingi476 – 4761Calcium 3Imported

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. metalloendopeptidase activity Source: InterPro

    Keywords - Ligandi

    CalciumImported, Metal-bindingImported, ZincImported

    Enzyme and pathway databases

    BioCyciPPOL886882:GBY1-4433-MONOMER.

    Protein family/group databases

    MEROPSiM04.001.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    BacillolysinImported
    Gene namesi
    Ordered Locus Names:PPSC2_c4320Imported
    OrganismiPaenibacillus polymyxa (strain SC2) (Bacillus polymyxa)Imported
    Taxonomic identifieri886882 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
    ProteomesiUP000006868: Chromosome

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4B52X-ray1.76A/B289-592[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000247250.
    OMAiPLRTRYI.

    Family and domain databases

    Gene3Di3.10.170.10. 1 hit.
    InterProiIPR011096. FTP_domain.
    IPR023612. Peptidase_M4.
    IPR001570. Peptidase_M4_C_domain.
    IPR013856. Peptidase_M4_domain.
    [Graphical view]
    PfamiPF07504. FTP. 1 hit.
    PF01447. Peptidase_M4. 1 hit.
    PF02868. Peptidase_M4_C. 1 hit.
    [Graphical view]
    PRINTSiPR00730. THERMOLYSIN.

    Sequencei

    Sequence statusi: Complete.

    E3E6L0-1 [UniParc]FASTAAdd to Basket

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    MKKVWVSLLG GAMLLGSVAS GASAESSVSG PAQLTPTFHA EQWKAPTSVS    50
    GDDIVWSYLN RQKKSLLGVD SSSVREQFRI VDRTSDKSGV SHYRLKQYVN 100
    GIPVYGAEQT IHVGKSGEVT SYLGAVVNED QQAEATQGTT PKISASEAVY 150
    TAYKEAAARI EALPTSDDTI SKDAEEPSSV SKDTYAEAAN NEKTLSVDKD 200
    ELSLDQASVL KDSKIEAVEP EKSSIAKIAN LQPEVDPKAE LYYYPKGDDL 250
    LLVYVTEVNV LEPAPLRTRY IIDANDGSIV FQYDIINEAT GTGKGVLGDS 300
    KSFTTTASGS SYQLKDTTRG NGIVTYTASN RQSIPGTILT DADNVWNDPA 350
    GVDAHAYAAK TYDYYKAKFG RNSIDGRGLQ LRSTVHYGSR YNNAFWNGSQ 400
    MTYGDGDGST FIAFSGDPDV VGHELTHGVT EYTSNLEYYG ESGALNEAFS 450
    DVIGNDIQRK NWLVGDDIYT PNIAGDALRS MSNPTLYDQP DHYSNLYRGS 500
    SDNGGVHTNS GIINKAYYLL AQGGNFHGVT VNGIGRDAAV QIYYSAFTNY 550
    LTSSSDFSNA RAAVIQAAKD LYGANSAEAT AAAKSFDAVG VN 592
    Length:592
    Mass (Da):63,603
    Last modified:January 11, 2011 - v1
    Checksum:i27B96B6EA81B604F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO58270.1.
    RefSeqiYP_003948511.1. NC_014622.1.

    Genome annotation databases

    EnsemblBacteriaiADO58270; ADO58270; PPSC2_c4320.
    GeneIDi9852609.
    KEGGippm:PPSC2_c4320.
    PATRICi42511738. VBIPaePol172748_4127.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002213 Genomic DNA. Translation: ADO58270.1 .
    RefSeqi YP_003948511.1. NC_014622.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4B52 X-ray 1.76 A/B 289-592 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    MEROPSi M04.001.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO58270 ; ADO58270 ; PPSC2_c4320 .
    GeneIDi 9852609.
    KEGGi ppm:PPSC2_c4320.
    PATRICi 42511738. VBIPaePol172748_4127.

    Phylogenomic databases

    HOGENOMi HOG000247250.
    OMAi PLRTRYI.

    Enzyme and pathway databases

    BioCyci PPOL886882:GBY1-4433-MONOMER.

    Family and domain databases

    Gene3Di 3.10.170.10. 1 hit.
    InterProi IPR011096. FTP_domain.
    IPR023612. Peptidase_M4.
    IPR001570. Peptidase_M4_C_domain.
    IPR013856. Peptidase_M4_domain.
    [Graphical view ]
    Pfami PF07504. FTP. 1 hit.
    PF01447. Peptidase_M4. 1 hit.
    PF02868. Peptidase_M4_C. 1 hit.
    [Graphical view ]
    PRINTSi PR00730. THERMOLYSIN.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity."
      Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B.
      J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SC2Imported.
    2. "Structure of gentlyase, the neutral metalloprotease of Paenibacillus polymyxa."
      Ruf A., Stihle M., Benz J., Schmidt M., Sobek H.
      Acta Crystallogr. D 69:24-31(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 289-592 IN COMPLEX WITH CALCIUM AND ZINC.

    Entry informationi

    Entry nameiE3E6L0_PAEPS
    AccessioniPrimary (citable) accession number: E3E6L0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3