Bacillolysin - Paenibacillus polymyxa (strain SC2)

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E3E6L0 (E3E6L0_PAEPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 18. History...

Clusters with 100%, 90%, 50% identity |

Third-party data

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info Customize order

Names and origin

Protein names

Submitted name:
Bacillolysin EMBL ADO58270.1

Gene names

Ordered Locus Names:

PPSC2_c4320 EMBL ADO58270.1

Organism

Paenibacillus polymyxa (strain SC2) (Bacillus polymyxa) [Complete proteome] [HAMAP]

Taxonomic identifier

Taxonomic lineage

Bacteria › Firmicutes › Bacilli › Bacillales › Paenibacillaceae › Paenibacillus ›

Protein attributes

Sequence length	592 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 4B52 Complete proteome
Gene Ontology (GO)
Biological_process	proteolysis Inferred from electronic annotation. Source: InterPro
Molecular_function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

E3E6L0 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: 27B96B6EA81B604F
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592

63,603

        10         20         30         40         50         60 
MKKVWVSLLG GAMLLGSVAS GASAESSVSG PAQLTPTFHA EQWKAPTSVS GDDIVWSYLN 

        70         80         90        100        110        120 
RQKKSLLGVD SSSVREQFRI VDRTSDKSGV SHYRLKQYVN GIPVYGAEQT IHVGKSGEVT 

       130        140        150        160        170        180 
SYLGAVVNED QQAEATQGTT PKISASEAVY TAYKEAAARI EALPTSDDTI SKDAEEPSSV 

       190        200        210        220        230        240 
SKDTYAEAAN NEKTLSVDKD ELSLDQASVL KDSKIEAVEP EKSSIAKIAN LQPEVDPKAE 

       250        260        270        280        290        300 
LYYYPKGDDL LLVYVTEVNV LEPAPLRTRY IIDANDGSIV FQYDIINEAT GTGKGVLGDS 

       310        320        330        340        350        360 
KSFTTTASGS SYQLKDTTRG NGIVTYTASN RQSIPGTILT DADNVWNDPA GVDAHAYAAK 

       370        380        390        400        410        420 
TYDYYKAKFG RNSIDGRGLQ LRSTVHYGSR YNNAFWNGSQ MTYGDGDGST FIAFSGDPDV 

       430        440        450        460        470        480 
VGHELTHGVT EYTSNLEYYG ESGALNEAFS DVIGNDIQRK NWLVGDDIYT PNIAGDALRS 

       490        500        510        520        530        540 
MSNPTLYDQP DHYSNLYRGS SDNGGVHTNS GIINKAYYLL AQGGNFHGVT VNGIGRDAAV 

       550        560        570        580        590 
QIYYSAFTNY LTSSSDFSNA RAAVIQAAKD LYGANSAEAT AAAKSFDAVG VN

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Complete genome sequence of Paenibacillus polymyxa SC2, a strain of plant growth-promoting Rhizobacterium with broad-spectrum antimicrobial activity." Ma M., Wang C., Ding Y., Li L., Shen D., Jiang X., Guan D., Cao F., Chen H., Feng R., Wang X., Ge Y., Yao L., Bing X., Yang X., Li J., Du B. J. Bacteriol. 193:311-312(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SC2.
[2]	"Structure of Gentlyase, the neutral metalloprotease of Paenibacillus polymyxa." Ruf A., Stihle M., Benz J., Schmidt M., Sobek H. Acta Crystallogr. D 69:24-31(2013) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.76 ANGSTROMS) OF 289-592.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

CP002213 Genomic DNA. Translation: ADO58270.1.

RefSeq

YP_003948511.1. NC_014622.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
4B52	X-ray	1.76	A/B	289-592	[»]

ModBase

Protein family/group databases

MEROPS

Protocols and materials databases

StructuralBiologyKnowledgebase

Genome annotation databases

EnsemblBacteria

ADO58270; ADO58270; PPSC2_c4320.

GeneID

KEGG

ppm:PPSC2_c4320.

PATRIC

42511738. VBIPaePol172748_4127.

Organism-specific databases

CMR

Phylogenomic databases

HOGENOM

OMA

Family and domain databases

Gene3D

3.10.170.10. 1 hit.

InterPro

IPR011096. FTP_domain.
IPR023612. Peptidase_M4.
IPR001570. Peptidase_M4_C_domain.
IPR013856. Peptidase_M4_domain.
[Graphical view]

Pfam

PF07504. FTP. 1 hit.
PF01447. Peptidase_M4. 1 hit.
PF02868. Peptidase_M4_C. 1 hit.
[Graphical view]

PRINTS

PR00730. THERMOLYSIN.

ProtoNet

Entry information

Entry name

E3E6L0_PAEPS

Accession

Primary (citable) accession number: E3E6L0

Entry history

Integrated into UniProtKB/TrEMBL:	January 11, 2011
Last sequence update:	January 11, 2011
Last modified:	May 1, 2013
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

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Names·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info