Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

amyA

Organism
Erwinia sp. (strain Ejp617)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi106Calcium 1UniRule annotation1
Metal bindingi200Calcium 1UniRule annotation1
Metal bindingi208Calcium 2UniRule annotation1
Active sitei237NucleophileUniRule annotation1
Metal bindingi241Calcium 1; via carbonyl oxygenUniRule annotation1
Active sitei267Proton donorUniRule annotation1
Metal bindingi420Calcium 3UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported
Gene namesi
Name:amyAImported
Ordered Locus Names:EJP617_32060Imported
OrganismiErwinia sp. (strain Ejp617)Imported
Taxonomic identifieri215689 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeErwinia
Proteomesi
  • UP000006865 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini6 – 404AamyInterPro annotationAdd BLAST399

Phylogenomic databases

KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

E3DIE4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMRNLTLLQ FFHWYYPTGG KLWPEAAERA PWLAEMGISA VWLPPAYKGE
60 70 80 90 100
SGGYSVGYDS YDLFDLGEFD QKGSRATKYG DKQQLLHAVE TLKAHGVGVL
110 120 130 140 150
LDVVLNHKMG ADEKEQIQVN RVNPDNREEI DPEVLEAEAW TRFTFPARRG
160 170 180 190 200
QYSQFTWDYK CFSGVDHIEN PDENGVFKIV NDYTGEGWNQ QVDDELGNFD
210 220 230 240 250
YLMGANIDFR NHAVTEELKY WARWVMDEVH CSGFRLDAVK HIPAWFYKEW
260 270 280 290 300
IEHVQEVAEE PLFIVAEYWS HEVDKLQQYI HQVEGKTMLF DAPLQMNFHR
310 320 330 340 350
ASKQGADYDL SQIFTNTLVA ADPWHAVTLV ANHDTQPLQA LEAPVEPWFK
360 370 380 390 400
PLAYALILLR ENGVPVLFYP DLFGASYEDE GNDGEQYQID IPIIAELEAL
410 420 430 440 450
VRARQLYAHG AQREWFDNPD CIAFSRSGTE ELPGCVVIMS NSGAGEKTLE
460 470 480 490 500
LGENFAGKQW YDYLGHVADR INSDEQGTAV FRCQPGSVSV WVIEQQPVAD
Length:500
Mass (Da):57,084
Last modified:January 11, 2011 - v1
Checksum:iBCDCDE732E22A593
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002124 Genomic DNA. Translation: ADP12887.1.
RefSeqiWP_014544519.1. NC_017445.1.

Genome annotation databases

EnsemblBacteriaiADP12887; ADP12887; EJP617_32060.
KEGGierj:EJP617_32060.
PATRICifig|215689.3.peg.3402.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002124 Genomic DNA. Translation: ADP12887.1.
RefSeqiWP_014544519.1. NC_017445.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADP12887; ADP12887; EJP617_32060.
KEGGierj:EJP617_32060.
PATRICifig|215689.3.peg.3402.

Phylogenomic databases

KOiK01176.
OMAiVLNHKMG.
OrthoDBiPOG091H0HQ3.

Family and domain databases

InterProiView protein in InterPro
IPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR006047. Glyco_hydro_13_cat_dom.
IPR017853. Glycoside_hydrolase_SF.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiE3DIE4_ERWSE
AccessioniPrimary (citable) accession number: E3DIE4
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: June 7, 2017
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.