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E3D837

- E3D837_GARV3

UniProt

E3D837 - E3D837_GARV3

Protein
Submitted name:

BNR/Asp-box repeat protein

Gene

HMPREF0421_20186

Organism
Gardnerella vaginalis (strain ATCC 14019 / 317)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 23 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. exo-alpha-sialidase activity Source: InterPro

    Enzyme and pathway databases

    BioCyciGVAG525284:GI3V-192-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    BNR/Asp-box repeat proteinImported
    Gene namesi
    Ordered Locus Names:HMPREF0421_20186Imported
    OrganismiGardnerella vaginalis (strain ATCC 14019 / 317)Imported
    Taxonomic identifieri525284 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
    ProteomesiUP000001453: Chromosome

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000079971.
    KOiK01186.
    OrthoDBiEOG61CM2G.

    Family and domain databases

    Gene3Di2.120.10.10. 2 hits.
    2.60.120.200. 1 hit.
    InterProiIPR002860. BNR_rpt.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PfamiPF02012. BNR. 1 hit.
    [Graphical view]
    SUPFAMiSSF49899. SSF49899. 1 hit.
    SSF50939. SSF50939. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    E3D837-1 [UniParc]FASTAAdd to Basket

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    MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN    50
    RKDKNEEINQ NEGIIGFKFV ANSDCDLLDI KPAQKSEASA QQEHTTPIIK 100
    ISIKEDAPLL SAQNLLEDSA DANGAKEIAL QMEDALGACD GREHDFAITY 150
    GSFGSRFYLD GYQCFASATN LGPQRVSGKA AEVCAAQAES SQIYDFYYSS 200
    HLPNPEEIAN SATQAQPDIW FAGPTICARD IKRVSCNSSG TLHIQFRLRG 250
    PGQHGVLFAA GTVGTKTNLE SSEKISVYAG PEGIKITLID SETCIKSVIE 300
    AAASVDDGEW HDLIIRANRG AIDIYVDGYS ESHNIGQFWF ANIPELNAVS 350
    IGEDLRGVRL MGEARTGGIY FSALTEGQIQ RISRVKPLVT TALFDTGYAG 400
    SRSYRIPSLV KTRMGTLIAG ADQRTSVSND APNHINFVIR RSTDGGKTWK 450
    PLQTVINMPG KNLGKLGASA IDSCPILDPA GKSERINVLI DLNPSGIGLT 500
    NCKTDVGVDE CGRIKMEDRF GRHYAALMDG SAAVKLPCDS SEKECATKWL 550
    VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK 600
    TCYIAQIYSD DDGKTWSATR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH 650
    YGRILVPFYC SGKSKSHYSS GALISDDDGK TWSRGKMINE GRLINGKIVD 700
    PATMQDDDAT SSETVFVERK NGDILAFFRN QNRSGCVGKA ISHDCGETWS 750
    ELIFDTSLPE IFSQPSATCF NSENADNADC IAFANASQMM PYRGRGVVRF 800
    SYDGGKTWAK SVCINPFHHV YQCLSSSNKR TLQLLWERET TGIYITAIDS 850
    NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER 900
    SQHGRDI 907
    Length:907
    Mass (Da):99,756
    Last modified:January 11, 2011 - v1
    Checksum:i60F7F5FAA1041E2A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002104 Genomic DNA. Translation: ADP38272.1.
    RefSeqiYP_003985295.1. NC_014644.1.

    Genome annotation databases

    EnsemblBacteriaiADP38272; ADP38272; HMPREF0421_20186.
    GeneIDi9903725.
    KEGGigvg:HMPREF0421_20186.
    PATRICi42627201. VBIGarVag39333_0178.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002104 Genomic DNA. Translation: ADP38272.1 .
    RefSeqi YP_003985295.1. NC_014644.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADP38272 ; ADP38272 ; HMPREF0421_20186 .
    GeneIDi 9903725.
    KEGGi gvg:HMPREF0421_20186.
    PATRICi 42627201. VBIGarVag39333_0178.

    Phylogenomic databases

    HOGENOMi HOG000079971.
    KOi K01186.
    OrthoDBi EOG61CM2G.

    Enzyme and pathway databases

    BioCyci GVAG525284:GI3V-192-MONOMER.

    Family and domain databases

    Gene3Di 2.120.10.10. 2 hits.
    2.60.120.200. 1 hit.
    InterProi IPR002860. BNR_rpt.
    IPR008985. ConA-like_lec_gl_sf.
    IPR013320. ConA-like_subgrp.
    IPR026856. Sialidase_fam.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    Pfami PF02012. BNR. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49899. SSF49899. 1 hit.
    SSF50939. SSF50939. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
      Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
      PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 14019 / 317Imported.

    Entry informationi

    Entry nameiE3D837_GARV3
    AccessioniPrimary (citable) accession number: E3D837
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 23 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3