SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

E3D837

- E3D837_GARV3

UniProt

E3D837 - E3D837_GARV3

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

BNR/Asp-box repeat protein

Gene
HMPREF0421_20186
Organism
Gardnerella vaginalis (strain ATCC 14019 / 317)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciGVAG525284:GI3V-192-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
BNR/Asp-box repeat proteinImported
Gene namesi
Ordered Locus Names:HMPREF0421_20186Imported
OrganismiGardnerella vaginalis (strain ATCC 14019 / 317)Imported
Taxonomic identifieri525284 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella
ProteomesiUP000001453: Chromosome

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000079971.
KOiK01186.
OrthoDBiEOG61CM2G.

Family and domain databases

Gene3Di2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProiIPR002860. BNR_rpt.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PfamiPF02012. BNR. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.

Sequencei

Sequence statusi: Complete.

E3D837-1 [UniParc]FASTAAdd to Basket

« Hide

MERRSTKTTS LIEDIADIKG SEHTRFNHAT IKITPSSEIK KYSENESGIN    50
RKDKNEEINQ NEGIIGFKFV ANSDCDLLDI KPAQKSEASA QQEHTTPIIK 100
ISIKEDAPLL SAQNLLEDSA DANGAKEIAL QMEDALGACD GREHDFAITY 150
GSFGSRFYLD GYQCFASATN LGPQRVSGKA AEVCAAQAES SQIYDFYYSS 200
HLPNPEEIAN SATQAQPDIW FAGPTICARD IKRVSCNSSG TLHIQFRLRG 250
PGQHGVLFAA GTVGTKTNLE SSEKISVYAG PEGIKITLID SETCIKSVIE 300
AAASVDDGEW HDLIIRANRG AIDIYVDGYS ESHNIGQFWF ANIPELNAVS 350
IGEDLRGVRL MGEARTGGIY FSALTEGQIQ RISRVKPLVT TALFDTGYAG 400
SRSYRIPSLV KTRMGTLIAG ADQRTSVSND APNHINFVIR RSTDGGKTWK 450
PLQTVINMPG KNLGKLGASA IDSCPILDPA GKSERINVLI DLNPSGIGLT 500
NCKTDVGVDE CGRIKMEDRF GRHYAALMDG SAAVKLPCDS SEKECATKWL 550
VFPDGSIKNC DSHNDLRNNS HSNQTCDSST WNIWKSQEIA SESQPLFAEK 600
TCYIAQIYSD DDGKTWSATR LIDHMVKEPW MSFAGVCPGN GIVIRQSEKH 650
YGRILVPFYC SGKSKSHYSS GALISDDDGK TWSRGKMINE GRLINGKIVD 700
PATMQDDDAT SSETVFVERK NGDILAFFRN QNRSGCVGKA ISHDCGETWS 750
ELIFDTSLPE IFSQPSATCF NSENADNADC IAFANASQMM PYRGRGVVRF 800
SYDGGKTWAK SVCINPFHHV YQCLSSSNKR TLQLLWERET TGIYITAIDS 850
NLWKQDNLQI DFKSNAKSLN NTDLDCIKNK INTSEKMKDL EEGSLTRTER 900
SQHGRDI 907
Length:907
Mass (Da):99,756
Last modified:January 11, 2011 - v1
Checksum:i60F7F5FAA1041E2A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002104 Genomic DNA. Translation: ADP38272.1.
RefSeqiYP_003985295.1. NC_014644.1.

Genome annotation databases

EnsemblBacteriaiADP38272; ADP38272; HMPREF0421_20186.
GeneIDi9903725.
KEGGigvg:HMPREF0421_20186.
PATRICi42627201. VBIGarVag39333_0178.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002104 Genomic DNA. Translation: ADP38272.1 .
RefSeqi YP_003985295.1. NC_014644.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ADP38272 ; ADP38272 ; HMPREF0421_20186 .
GeneIDi 9903725.
KEGGi gvg:HMPREF0421_20186.
PATRICi 42627201. VBIGarVag39333_0178.

Phylogenomic databases

HOGENOMi HOG000079971.
KOi K01186.
OrthoDBi EOG61CM2G.

Enzyme and pathway databases

BioCyci GVAG525284:GI3V-192-MONOMER.

Family and domain databases

Gene3Di 2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProi IPR002860. BNR_rpt.
IPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
Pfami PF02012. BNR. 1 hit.
[Graphical view ]
SUPFAMi SSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
    Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
    PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14019 / 317.

Entry informationi

Entry nameiE3D837_GARV3
AccessioniPrimary (citable) accession number: E3D837
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 16, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi