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E3D7T3 (E3D7T3_GARV3) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=4.1.1.31 EMBL ADP38241.1
Gene names
Name:ppc EMBL ADP38241.1
Ordered Locus Names:HMPREF0421_20155 EMBL ADP38241.1
OrganismGardnerella vaginalis (strain ATCC 14019 / 317) [Complete proteome] [HAMAP] EMBL ADP38241.1
Taxonomic identifier525284 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeGardnerella

Protein attributes

Sequence length918 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle By similarity. SAAS SAAS021135

Catalytic activity

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-. SAAS SAAS018129

Cofactor

Magnesium By similarity. SAAS SAAS018129

Sequences

Sequence LengthMass (Da)Tools
E3D7T3 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: B503CE7CE964BC27

FASTA918103,252
        10         20         30         40         50         60 
MTTQNQQVTP ADATIVTSGL GRKGPEEREL PASLKQDMDL CLHILRDVLG EFDEKLLTVF 

        70         80         90        100        110        120 
DEVRLNAVNA STAHFAQMVD AQGTEDDGLN KAVEKINGMD LPDMQLLARA FATYFHLANL 

       130        140        150        160        170        180 
CEENYRVSVL HQRECEVEES NPVDPVNELT CAYHKLLTEM SPAQAKELLN KLEFHPVFTA 

       190        200        210        220        230        240 
HPTEARRKAV AGKIRRISKL LSKHNRLGGS DKRENYRRLY NEIDALLRTS PIALKKPTPV 

       250        260        270        280        290        300 
EEADTILDIF DATLFNTIPL VYRRFDDWLL GKKAGLVPPR CPAFFHPGSW IGSDRDGNPN 

       310        320        330        340        350        360 
VTAKVSRQVA SKFSNHVLKA LEERTREVGK CLTMETRTTP PSVELLELWN RQREMSEQLT 

       370        380        390        400        410        420 
ENASDVSNSE PHRAVMLVMA DRLHHTISRN TDLMYHSCEE FIEDLRIVQR SLAEAGDARA 

       430        440        450        460        470        480 
AYGPLQDLIW QAQTFGFHMV EMEFRQHSLV HSRALEDIRE HGLHGERGPL QPMTREVLDT 

       490        500        510        520        530        540 
FRALGAIQKR NGMRAARRYI ISFAKSAQHV RDVFELNRLA FAHPQDAPTI DVIPLFEQLE 

       550        560        570        580        590        600 
DLQNSVNVLE EIIKIPEVQA RLKATGRKME VMLGYSDSSK DAGPTSATLA LHSAQERIAQ 

       610        620        630        640        650        660 
WAKDHDIDLT LFHGRGGAVG RGGGPANRAV LAQPVGSVNC RFKLTEQGEV IFARYGNPIL 

       670        680        690        700        710        720 
AIRHLESVAA ATLLQSAPSV EKTNTEMTHK YADMAQKLDV AAHNRFIDLL QTDDFTPWFS 

       730        740        750        760        770        780 
TVTPLSEIGL LPIGSRPAKR GLGAKSLDDL RTIPWVFSWA QARINLAAWY GLGTACEKFG 

       790        800        810        820        830        840 
DLETLRRAYE EWPLFSTFID NIEMSLAKTD ERIARMYLSL GDREDLSDKV LSEMQLTRKW 

       850        860        870        880        890        900 
VLQIVGDKWP LQHRHVLGQA IRVRSPYVDA LSVIQSLALH KLRNKVDKEE LSESQQAEFI 

       910 
YLILCTVSGV AAGLQNTG 

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References

[1]"Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential."
Yeoman C.J., Yildirim S., Thomas S.M., Durkin A.S., Torralba M., Sutton G., Buhay C.J., Ding Y., Dugan-Rocha S.P., Muzny D.M., Qin X., Gibbs R.A., Leigh S.R., Stumpf R., White B.A., Highlander S.K., Nelson K.E., Wilson B.A.
PLoS ONE 5:E12411-E12411(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 14019 / 317.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002104 Genomic DNA. Translation: ADP38241.1.
RefSeqYP_003985264.1. NC_014644.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADP38241; ADP38241; HMPREF0421_20155.
GeneID9903691.
KEGGgvg:HMPREF0421_20155.
PATRIC42627141. VBIGarVag39333_0151.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000238647.
KOK01595.
OrthoDBEOG6TJ7T8.

Enzyme and pathway databases

BioCycGVAG525284:GI3V-158-MONOMER.

Family and domain databases

InterProIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamPF00311. PEPcase. 2 hits.
[Graphical view]
PRINTSPR00150. PEPCARBXLASE.
SUPFAMSSF51621. SSF51621. 1 hit.
PROSITEPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3D7T3_GARV3
AccessionPrimary (citable) accession number: E3D7T3
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: November 13, 2013
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)