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Protein
Submitted name:

DNA ligase

Gene

ligA-2

Organism
Neisseria meningitidis serogroup B (strain alpha710)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNMEN630588:GLHP-2033-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Name:ligA-2Imported
Ordered Locus Names:NMBB_2353Imported
OrganismiNeisseria meningitidis serogroup B (strain alpha710)Imported
Taxonomic identifieri630588 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
ProteomesiUP000006929 Componenti: Chromosome

Structurei

3D structure databases

ProteinModelPortaliE3D3V8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

E3D3V8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIKKIIGGII PIFTAVFIPA SAGAADLMLA QEYKGQDIAG WAMSEKLDGV
60 70 80 90 100
RAYWDGKHLI SRQGYAFAPP KGFTAQFPPY PLDGELYSGR GQFEQISATV
110 120 130 140 150
RSVSSDWRGI RLHVFDVPKA QGNLYQRLAV ATQWLKTHPN APITIIPQIK
160 170 180 190 200
VRDRQHAMDF LKQIEAQGGE GVMLRQPESR YSGGRSSQLL KLKSQYDDEC
210 220 230 240 250
TVTRHYEGKG RNAGRLGAVG CKNRHGEFRI GSGFKDKDRD NPPKIGTLIT
260 270
YRYRGFTRKG TPKFATFVRA RTDR
Length:274
Mass (Da):30,679
Last modified:January 11, 2011 - v1
Checksum:iCFDDCEC5673CDB8E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001561 Genomic DNA. Translation: ADO32467.1.
RefSeqiWP_002257000.1. NC_017505.1.

Genome annotation databases

EnsemblBacteriaiADO32467; ADO32467; NMBB_2353.
KEGGinmp:NMBB_2353.
PATRICi43138200. VBINeiMen23504_2748.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001561 Genomic DNA. Translation: ADO32467.1.
RefSeqiWP_002257000.1. NC_017505.1.

3D structure databases

ProteinModelPortaliE3D3V8.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiADO32467; ADO32467; NMBB_2353.
KEGGinmp:NMBB_2353.
PATRICi43138200. VBINeiMen23504_2748.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciNMEN630588:GLHP-2033-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence."
    Joseph B., Schneiker-Bekel S., Schramm-Gluck A., Blom J., Claus H., Linke B., Schwarz R.F., Becker A., Goesmann A., Frosch M., Schoen C.
    J. Bacteriol. 192:5363-5377(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: alpha710Imported.

Entry informationi

Entry nameiE3D3V8_NEIM7
AccessioniPrimary (citable) accession number: E3D3V8
Entry historyi
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: July 22, 2015
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.