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E3D3V8 (E3D3V8_NEIM7) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase EMBL ADO32467.1
Gene names
Name:ligA-2 EMBL ADO32467.1
Ordered Locus Names:NMBB_2353 EMBL ADO32467.1
OrganismNeisseria meningitidis serogroup B (strain alpha710) [Complete proteome] [HAMAP]
Taxonomic identifier630588 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Neisseriales › Neisseriaceae › Neisseria ›

Protein attributes

Sequence length274 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ADO32467.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
E3D3V8 [UniParc].

Last modified January 11, 2011. Version 1.
Checksum: CFDDCEC5673CDB8E

FASTA27430,679
        10         20         30         40         50         60 
MIKKIIGGII PIFTAVFIPA SAGAADLMLA QEYKGQDIAG WAMSEKLDGV RAYWDGKHLI 

        70         80         90        100        110        120 
SRQGYAFAPP KGFTAQFPPY PLDGELYSGR GQFEQISATV RSVSSDWRGI RLHVFDVPKA 

       130        140        150        160        170        180 
QGNLYQRLAV ATQWLKTHPN APITIIPQIK VRDRQHAMDF LKQIEAQGGE GVMLRQPESR 

       190        200        210        220        230        240 
YSGGRSSQLL KLKSQYDDEC TVTRHYEGKG RNAGRLGAVG CKNRHGEFRI GSGFKDKDRD 

       250        260        270 
NPPKIGTLIT YRYRGFTRKG TPKFATFVRA RTDR

« Hide

References

[1]"Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence."
Joseph B., Schneiker-Bekel S., Schramm-Gluck A., Blom J., Claus H., Linke B., Schwarz R.F., Becker A., Goesmann A., Frosch M., Schoen C.
J. Bacteriol. 192:5363-5377(2010) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: alpha710.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001561 Genomic DNA. Translation: ADO32467.1.
RefSeqYP_005883599.1. NC_017505.1.

3D structure databases

ProteinModelPortalE3D3V8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADO32467; ADO32467; NMBB_2353.
GeneID12399981.
KEGGnmp:NMBB_2353.
PATRIC43138200. VBINeiMen23504_2748.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameE3D3V8_NEIM7
AccessionPrimary (citable) accession number: E3D3V8
Entry history
Integrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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