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E3D3V8

- E3D3V8_NEIM7

UniProt

E3D3V8 - E3D3V8_NEIM7

Protein
Submitted name:

DNA ligase

Gene

ligA-2

Organism
Neisseria meningitidis serogroup B (strain alpha710)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (11 Jan 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciNMEN630588:GLHP-2033-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Name:ligA-2Imported
    Ordered Locus Names:NMBB_2353Imported
    OrganismiNeisseria meningitidis serogroup B (strain alpha710)Imported
    Taxonomic identifieri630588 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaNeisserialesNeisseriaceaeNeisseria
    ProteomesiUP000006929: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliE3D3V8.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E3D3V8-1 [UniParc]FASTAAdd to Basket

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    MIKKIIGGII PIFTAVFIPA SAGAADLMLA QEYKGQDIAG WAMSEKLDGV    50
    RAYWDGKHLI SRQGYAFAPP KGFTAQFPPY PLDGELYSGR GQFEQISATV 100
    RSVSSDWRGI RLHVFDVPKA QGNLYQRLAV ATQWLKTHPN APITIIPQIK 150
    VRDRQHAMDF LKQIEAQGGE GVMLRQPESR YSGGRSSQLL KLKSQYDDEC 200
    TVTRHYEGKG RNAGRLGAVG CKNRHGEFRI GSGFKDKDRD NPPKIGTLIT 250
    YRYRGFTRKG TPKFATFVRA RTDR 274
    Length:274
    Mass (Da):30,679
    Last modified:January 11, 2011 - v1
    Checksum:iCFDDCEC5673CDB8E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001561 Genomic DNA. Translation: ADO32467.1.
    RefSeqiYP_005883599.1. NC_017505.1.

    Genome annotation databases

    EnsemblBacteriaiADO32467; ADO32467; NMBB_2353.
    GeneIDi12399981.
    KEGGinmp:NMBB_2353.
    PATRICi43138200. VBINeiMen23504_2748.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001561 Genomic DNA. Translation: ADO32467.1 .
    RefSeqi YP_005883599.1. NC_017505.1.

    3D structure databases

    ProteinModelPortali E3D3V8.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADO32467 ; ADO32467 ; NMBB_2353 .
    GeneIDi 12399981.
    KEGGi nmp:NMBB_2353.
    PATRICi 43138200. VBINeiMen23504_2748.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci NMEN630588:GLHP-2033-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genome biology of a serogroup B carriage and disease strain supports a polygenic nature of meningococcal virulence."
      Joseph B., Schneiker-Bekel S., Schramm-Gluck A., Blom J., Claus H., Linke B., Schwarz R.F., Becker A., Goesmann A., Frosch M., Schoen C.
      J. Bacteriol. 192:5363-5377(2010) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: alpha710Imported.

    Entry informationi

    Entry nameiE3D3V8_NEIM7
    AccessioniPrimary (citable) accession number: E3D3V8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 11, 2011
    Last sequence update: January 11, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3