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Protein

Purine nucleoside phosphorylase DeoD-type

Gene

deoD

Organism
Shigella dysenteriae 1617
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Purine deoxynucleoside + phosphate = purine + 2'-deoxy-alpha-D-ribose 1-phosphate.UniRule annotationSAAS annotation
Purine nucleoside + phosphate = purine + alpha-D-ribose 1-phosphate.UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei5Purine nucleoside; shared with dimeric partnerUniRule annotation1
Binding sitei21Phosphate; via amide nitrogenUniRule annotation1
Binding sitei25PhosphateUniRule annotation1
Binding sitei44Phosphate; shared with dimeric partnerUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosyltransferaseUniRule annotationSAAS annotationImported, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Purine nucleoside phosphorylase DeoD-typeUniRule annotation (EC:2.4.2.1UniRule annotation)
Short name:
PNPUniRule annotation
Gene namesi
Name:deoDUniRule annotationImported
ORF Names:Asd1617_06119Imported, SD1617_3888Imported
OrganismiShigella dysenteriae 1617Imported
Taxonomic identifieri754093 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeShigella
Proteomesi
  • UP000031647 Componenti: Chromosome
  • UP000003738 Componenti: Unassembled WGS sequence

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei27N6-acetyllysineUniRule annotation1

Keywords - PTMi

AcetylationUniRule annotation

Interactioni

Subunit structurei

Homohexamer.UniRule annotationSAAS annotation

Structurei

3D structure databases

SMRiE2XD98
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini15 – 218PNP_UDP_1InterPro annotationAdd BLAST204

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni88 – 91Phosphate bindingUniRule annotation4
Regioni180 – 182Purine nucleoside bindingUniRule annotation3
Regioni204 – 205Purine nucleoside bindingUniRule annotation2

Sequence similaritiesi

Belongs to the PNP/UDP phosphorylase family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK03784

Family and domain databases

HAMAPiMF_01627 Pur_nucleosid_phosp, 1 hit
InterProiView protein in InterPro
IPR004402 DeoD-type
IPR018016 Nucleoside_phosphorylase_CS
IPR000845 Nucleoside_phosphorylase_d
IPR035994 Nucleoside_phosphorylase_sf
PANTHERiPTHR43691:SF2 PTHR43691:SF2, 1 hit
PfamiView protein in Pfam
PF01048 PNP_UDP_1, 1 hit
SUPFAMiSSF53167 SSF53167, 1 hit
TIGRFAMsiTIGR00107 deoD, 1 hit
PROSITEiView protein in PROSITE
PS01232 PNP_UDP_1, 1 hit

Sequencei

Sequence statusi: Complete.

E2XD98-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATPHINAEM GDFADVVLMP GDPLRAKYIA ETFLEDAREV NNVRGMLGFT
60 70 80 90 100
GTYKGRKISV MGHGMGIPSC SIYTKELITD FGVKKIIRVG SCGAVLPHVK
110 120 130 140 150
LRDVVIGMGA CTDSKVNRIR FKDHDFAAIA DFDMVRNAVD AAKALGVDAR
160 170 180 190 200
VGNLFSADLF YSPDGEMFDV MEKYGILGVE MEAAGIYGVA AEFGAKALTI
210 220 230
CTVSDHIRTH EQTTAAERQT TFNDMIKIAL ESVLLGNKE
Length:239
Mass (Da):25,935
Last modified:January 11, 2011 - v1
Checksum:iFA507ADA44F87781
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006736 Genomic DNA Translation: AHA68946.1
ADUT01000040 Genomic DNA Translation: EFP70468.1

Genome annotation databases

EnsemblBacteriaiAHA68946; AHA68946; Asd1617_06119
EFP70468; EFP70468; SD1617_3888
KEGGisdz:Asd1617_06119
PATRICifig|754093.4.peg.5979

Similar proteinsi

Entry informationi

Entry nameiE2XD98_SHIDY
AccessioniPrimary (citable) accession number: E2XD98
Entry historyiIntegrated into UniProtKB/TrEMBL: January 11, 2011
Last sequence update: January 11, 2011
Last modified: April 25, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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