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E2R8G3

- E2R8G3_CANFA

UniProt

E2R8G3 - E2R8G3_CANFA

Protein
Submitted name:

Uncharacterized protein

Gene

RPL31

Organism
Canis familiaris (Dog) (Canis lupus familiaris)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at protein leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:RPL31Imported
    OrganismiCanis familiaris (Dog) (Canis lupus familiaris)Imported
    Taxonomic identifieri9615 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
    ProteomesiUP000002254: Chromosome 10

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: InterPro

    Structurei

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    2ZKRelectron microscopy8.70x1-125[»]
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000005200.
    KOiK02910.
    OrthoDBiEOG7V768M.
    TreeFamiTF314858.

    Family and domain databases

    Gene3Di3.10.440.10. 1 hit.
    InterProiIPR000054. Ribosomal_L31e.
    IPR020052. Ribosomal_L31e_CS.
    IPR023621. Ribosomal_L31e_dom.
    [Graphical view]
    PANTHERiPTHR10956. PTHR10956. 1 hit.
    PfamiPF01198. Ribosomal_L31e. 1 hit.
    [Graphical view]
    ProDomiPD006030. Ribosomal_L31e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF54575. SSF54575. 1 hit.
    PROSITEiPS01144. RIBOSOMAL_L31E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    E2R8G3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAPAKKGGEK KKGRSAINEV VTREYTINIH KRIHGVGFKK RAPRALKEIR    50
    KFAMKEMGTP DVRIDTRLNK AVWAKGIRNV PYRIRVRLSR KRNEDEDSPN 100
    KLYTLVTYVP VTTFKNLQTV NVDEN 125
    Length:125
    Mass (Da):14,463
    Last modified:November 30, 2010 - v1
    Checksum:iBA9DBE79B9E1C071
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEX03007435 Genomic DNA. No translation available.
    AAEX03011895 Genomic DNA. No translation available.
    RefSeqiNP_001239132.1. NM_001252203.1.
    XP_005625755.1. XM_005625698.1.
    UniGeneiCfa.47838.

    Genome annotation databases

    EnsembliENSCAFT00000003480; ENSCAFP00000003226; ENSCAFG00000002215.
    ENSCAFT00000008024; ENSCAFP00000041626; ENSCAFG00000004996.
    GeneIDi609530.
    KEGGicfa:609530.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AAEX03007435 Genomic DNA. No translation available.
    AAEX03011895 Genomic DNA. No translation available.
    RefSeqi NP_001239132.1. NM_001252203.1.
    XP_005625755.1. XM_005625698.1.
    UniGenei Cfa.47838.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    2ZKR electron microscopy 8.70 x 1-125 [» ]
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSCAFT00000003480 ; ENSCAFP00000003226 ; ENSCAFG00000002215 .
    ENSCAFT00000008024 ; ENSCAFP00000041626 ; ENSCAFG00000004996 .
    GeneIDi 609530.
    KEGGi cfa:609530.

    Organism-specific databases

    CTDi 6160.

    Phylogenomic databases

    GeneTreei ENSGT00390000005200.
    KOi K02910.
    OrthoDBi EOG7V768M.
    TreeFami TF314858.

    Miscellaneous databases

    NextBioi 20893304.

    Family and domain databases

    Gene3Di 3.10.440.10. 1 hit.
    InterProi IPR000054. Ribosomal_L31e.
    IPR020052. Ribosomal_L31e_CS.
    IPR023621. Ribosomal_L31e_dom.
    [Graphical view ]
    PANTHERi PTHR10956. PTHR10956. 1 hit.
    Pfami PF01198. Ribosomal_L31e. 1 hit.
    [Graphical view ]
    ProDomi PD006030. Ribosomal_L31e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF54575. SSF54575. 1 hit.
    PROSITEi PS01144. RIBOSOMAL_L31E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence, comparative analysis and haplotype structure of the domestic dog."
      Broad Sequencing Platform
      Lindblad-Toh K., Wade C.M., Mikkelsen T.S., Karlsson E.K., Jaffe D.B., Kamal M., Clamp M., Chang J.L., Kulbokas E.J. III, Zody M.C., Mauceli E., Xie X., Breen M., Wayne R.K., Ostrander E.A., Ponting C.P., Galibert F., Smith D.R.
      , deJong P.J., Kirkness E.F., Alvarez P., Biagi T., Brockman W., Butler J., Chin C.-W., Cook A., Cuff J., Daly M.J., DeCaprio D., Gnerre S., Grabherr M., Kellis M., Kleber M., Bardeleben C., Goodstadt L., Heger A., Hitte C., Kim L., Koepfli K.-P., Parker H.G., Pollinger J.P., Searle S.M.J., Sutter N.B., Thomas R., Webber C., Baldwin J., Abebe A., Abouelleil A., Aftuck L., Ait-Zahra M., Aldredge T., Allen N., An P., Anderson S., Antoine C., Arachchi H., Aslam A., Ayotte L., Bachantsang P., Barry A., Bayul T., Benamara M., Berlin A., Bessette D., Blitshteyn B., Bloom T., Blye J., Boguslavskiy L., Bonnet C., Boukhgalter B., Brown A., Cahill P., Calixte N., Camarata J., Cheshatsang Y., Chu J., Citroen M., Collymore A., Cooke P., Dawoe T., Daza R., Decktor K., DeGray S., Dhargay N., Dooley K., Dooley K., Dorje P., Dorjee K., Dorris L., Duffey N., Dupes A., Egbiremolen O., Elong R., Falk J., Farina A., Faro S., Ferguson D., Ferreira P., Fisher S., FitzGerald M., Foley K., Foley C., Franke A., Friedrich D., Gage D., Garber M., Gearin G., Giannoukos G., Goode T., Goyette A., Graham J., Grandbois E., Gyaltsen K., Hafez N., Hagopian D., Hagos B., Hall J., Healy C., Hegarty R., Honan T., Horn A., Houde N., Hughes L., Hunnicutt L., Husby M., Jester B., Jones C., Kamat A., Kanga B., Kells C., Khazanovich D., Kieu A.C., Kisner P., Kumar M., Lance K., Landers T., Lara M., Lee W., Leger J.-P., Lennon N., Leuper L., LeVine S., Liu J., Liu X., Lokyitsang Y., Lokyitsang T., Lui A., Macdonald J., Major J., Marabella R., Maru K., Matthews C., McDonough S., Mehta T., Meldrim J., Melnikov A., Meneus L., Mihalev A., Mihova T., Miller K., Mittelman R., Mlenga V., Mulrain L., Munson G., Navidi A., Naylor J., Nguyen T., Nguyen N., Nguyen C., Nguyen T., Nicol R., Norbu N., Norbu C., Novod N., Nyima T., Olandt P., O'Neill B., O'Neill K., Osman S., Oyono L., Patti C., Perrin D., Phunkhang P., Pierre F., Priest M., Rachupka A., Raghuraman S., Rameau R., Ray V., Raymond C., Rege F., Rise C., Rogers J., Rogov P., Sahalie J., Settipalli S., Sharpe T., Shea T., Sheehan M., Sherpa N., Shi J., Shih D., Sloan J., Smith C., Sparrow T., Stalker J., Stange-Thomann N., Stavropoulos S., Stone C., Stone S., Sykes S., Tchuinga P., Tenzing P., Tesfaye S., Thoulutsang D., Thoulutsang Y., Topham K., Topping I., Tsamla T., Vassiliev H., Venkataraman V., Vo A., Wangchuk T., Wangdi T., Weiand M., Wilkinson J., Wilson A., Yadav S., Yang S., Yang X., Young G., Yu Q., Zainoun J., Zembek L., Zimmer A., Lander E.S.
      Nature 438:803-819(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BoxerImported.
    2. Cited for: STRUCTURE BY ELECTRON MICROSCOPY (8.70 ANGSTROMS).
    3. Ensembl
      Submitted (SEP-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: BoxerImported.
    4. Ensembl
      Submitted (DEC-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: BoxerImported.

    Entry informationi

    Entry nameiE2R8G3_CANFA
    AccessioniPrimary (citable) accession number: E2R8G3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 30, 2010
    Last sequence update: November 30, 2010
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

    Keywords - Technical termi

    3D-structureImported, Complete proteome, Reference proteomeImported

    External Data

    Dasty 3