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Protein
Submitted name:

RNA binding motif protein, X-linked

Gene

RBMX

Organism
Canis lupus familiaris (Dog) (Canis familiaris)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotationSAAS annotation

Enzyme and pathway databases

ReactomeiR-CFA-72163 mRNA Splicing - Major Pathway

Names & Taxonomyi

Protein namesi
Submitted name:
RNA binding motif protein, X-linkedImported
Gene namesi
Name:RBMXImported
OrganismiCanis lupus familiaris (Dog) (Canis familiaris)Imported
Taxonomic identifieri9615 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCarnivoraCaniformiaCanidaeCanis
Proteomesi
  • UP000002254 Componenti: Chromosome X

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiE2R068
PRIDEiE2R068

Expressioni

Gene expression databases

BgeeiENSCAFG00000018962

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9615.ENSCAFP00000027996

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini9 – 87RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiENOG410IHG3 Eukaryota
ENOG4111GI6 LUCA
GeneTreeiENSGT00710000106295
InParanoidiE2R068
OMAiDPGACFK
OrthoDBiEOG091G13K0
TreeFamiTF331833

Family and domain databases

Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR012604 RBM1CTR
IPR000504 RRM_dom
IPR003954 RRM_dom_euk
PfamiView protein in Pfam
PF08081 RBM1CTR, 1 hit
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SM00361 RRM_1, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Complete.

E2R068-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
KMVEADRPGK LFIGGLNTET NEKALEAVFG KYGRIVEVLL MKDRETNKSR
60 70 80 90 100
GFAFVTFESP ADAKDAARDM NGKSLDGKAI KVEQATKPSF ESGRRGPPPP
110 120 130 140 150
PRSRGPPRGL RGGRGGSGGT RGPPSRGGHM DDGGYSMNFN MSSSRGPLPV
160 170 180 190 200
KRGPPPRSGG PPPKRSAPSG PVRSSSGMGG RAPVSRGRDS YGGPPRREPL
210 220 230 240 250
PSRRDVYLSP RDDGYSTKDS YSSRDYPSSR DTRDYAPPPR DYTYRDYGHS
260 270 280 290 300
SSRDDYPSRG YSDRDGYGRD RDYSDHPSGG SYRDSYESYG NSRSAPPTRG
310 320 330 340 350
PPPSYGGSSR YDDYSSSRDG YGGSRDSYSS SRSDLYSSGR DRVGRQERGL
360 370 380 390
PPSMERGYPP PRDSYSSSSR GAPRGGGRGG SRSDRGGGRS RY
Length:392
Mass (Da):42,460
Last modified:October 31, 2012 - v2
Checksum:iAAD0769CEF99EBA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAEX03026954 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSCAFT00000030124; ENSCAFP00000027996; ENSCAFG00000018962

Similar proteinsi

Entry informationi

Entry nameiE2R068_CANLF
AccessioniPrimary (citable) accession number: E2R068
Entry historyiIntegrated into UniProtKB/TrEMBL: November 30, 2010
Last sequence update: October 31, 2012
Last modified: May 23, 2018
This is version 56 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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